PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026392038.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 260aa    MW: 28549.5 Da    PI: 9.4675
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026392038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.41.7e-1574120354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riNs +++Lr+l+P+       K++Ka++L ++++++k+L
  XP_026392038.1  74 KNHSEAERRRRERINSHLDTLRTLVPST-----DKMDKASVLAEVINHVKDL 120
                     58*************************7.....6****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDTFNLNSGV VYGNNPSLNG FSQNYGFQSN GKGGCSSSSS NSLVLDSERG ELVKAPSKLG  60
QKGVTEGKSL AALKNHSEAE RRRRERINSH LDTLRTLVPS TDKMDKASVL AEVINHVKDL  120
KRTALEASKG LVIPMDTDEV KVETYDDGML GRPFSIKATL CCDDRPEILP NLREALEACK  180
LETVKVEIST LGGRMKNVFV MASSRPDDSA EVRHLLMSSV HKALRSVLDK IPTTSEFTPR  240
KMLPHKKQRM SPFHSSTSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-38bHLH family protein