PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026391724.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 543aa MW: 59738.8 Da PI: 7.1436

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026391724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.2	1.1e-16	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_026391724.1 357 VHNLSERRRRDRINEKMKALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 403 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MNHCVPDWSM EDDLLPSVGN QKKSMGLDHE LVELLWHNGQ VVLHSQTHRK PSPTPHEFGH 60 IQKPERQMTK GVGSFGNFGH LIQEDDTASW IHYPLEDSLD KEFFPNFFCE LPNSHPIETE 120 KQVKHYQGEK NVSFGGSEET NVLFTSSAVR SQQTGVKQSN NVNLVQNPMP PPQLKIPDSA 180 RQDPNMEGTD KIQNFSHFSK PIKAELGSSN GRTIGKGSSQ VTRVDVGESS LMTIGSSHCG 240 SNQVINDADL SRVSSNALGT AGIFTGPSKE HLQMVFSHGE RGRTETLEPT VTSSSGGSGG 300 SFGGTGKQST STHSHKRKGR DVDESECPSE EAEFESVEAK KPPQRSGSNR RSRAAEVHNL 360 SERRRRDRIN EKMKALQELI PHCNKSDKAS MLDEAIEYLK SLQLQVQLMW MGGGMAPMMF 420 PGVQHYLSRM GMGMGPPPLP SMRSPMQLPR VPLVDQAISS ATAQNQPSMC PPAILNQVNF 480 QNQMQNPNFS EPYARYMGFH HMQTAQPTSM FNYGSQPMQQ GQKIGLNGLP SHGGTPSGNT 540 PSS

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MNHCVPDWSM EDDLLPSVGN QKKSMGLDHE LVELLWHNGQ VVLHSQTHRK PSPTPHEFGH  60
IQKPERQMTK GVGSFGNFGH LIQEDDTASW IHYPLEDSLD KEFFPNFFCE LPNSHPIETE  120
KQVKHYQGEK NVSFGGSEET NVLFTSSAVR SQQTGVKQSN NVNLVQNPMP PPQLKIPDSA  180
RQDPNMEGTD KIQNFSHFSK PIKAELGSSN GRTIGKGSSQ VTRVDVGESS LMTIGSSHCG  240
SNQVINDADL SRVSSNALGT AGIFTGPSKE HLQMVFSHGE RGRTETLEPT VTSSSGGSGG  300
SFGGTGKQST STHSHKRKGR DVDESECPSE EAEFESVEAK KPPQRSGSNR RSRAAEVHNL  360
SERRRRDRIN EKMKALQELI PHCNKSDKAS MLDEAIEYLK SLQLQVQLMW MGGGMAPMMF  420
PGVQHYLSRM GMGMGPPPLP SMRSPMQLPR VPLVDQAISS ATAQNQPSMC PPAILNQVNF  480
QNQMQNPNFS EPYARYMGFH HMQTAQPTSM FNYGSQPMQQ GQKIGLNGLP SHGGTPSGNT  540
PSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	367	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	8e-34	bHLH family protein