PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026391541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 252aa MW: 29334.5 Da PI: 8.4908 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101 | 7.3e-32 | 175 | 233 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt +C+vkk+ver aedp++v++tYeg+H h+ XP_026391541.1 175 LDDGYKWRKYGQKVVKDTQHPRSYYRCTVDTCRVKKRVERLAEDPRMVITTYEGRHGHT 233 59*******************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MTYSSSQLML NHGLLEGHHH NHHQEINIPL NDHMGLFTQN NSNFPLPNNW TFPPYGYHDN 60 PVFHHSTTSK IRRDAVSSHH FGGGDDDGFD NHDQQPPSSV QRFSSSTNLW PWGDVDNDVC 120 LGSINVKQQK CFGENNNNHH ELGISAMKMM KKVKGRRKIR EPRFCFKTKS EVDVLDDGYK 180 WRKYGQKVVK DTQHPRSYYR CTVDTCRVKK RVERLAEDPR MVITTYEGRH GHTPSQDQEN 240 SQAQLQTNNF FW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39410.1 | 3e-47 | WRKY family protein |