PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390748.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 335aa    MW: 38146.7 Da    PI: 6.7666
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.75.7e-1045138399
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-.TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvlt.kGWkeFvkangLkegDfvvFkldgrsefel 92 
                     k+  ++   + g+l +p +f+ ++g ++      tle ++g +W+v+l  +++s++    + ++ +   +F +   ++ g +++Fk++g+s f  
  XP_026390748.1  45 KII-HNAIIQDGNLKIPPEFFMNYGADS---HHATLEVPDGLTWDVQL--KRNSNGgnaaVSFQiGQLAQFFEYYSIRPGHVLLFKYHGNSHF-- 131
                     544.556667789********9998774...469**************..4444444577777734579********************9999.. PP

                     EEEEE-S CS
              B3  93 vvkvfrk 99 
                     +v +f++
  XP_026390748.1 132 HVVIFDT 138
                     9999987 PP
2B333.95.5e-11239324191
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     ff++ +++++++++ l +p +f e+h+ +   +k+++ + e+gr W + +    k++r  lt G  +  k+n+L +gD+++ +l+++++ +
  XP_026390748.1 239 FFTIALQPSYMNHKYLHIPVSFNEKHMFS--HGKKIKAQVEDGRFWLLAF---PKDERGRLTIGVASLLKDNDLVVGDIILVELMKEMKSK 324
                     777788899999999***********877..45689999999********...55555579**********************99884443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAITRSRRAS RAPRPNVFIS GGNIVASTDD DGTNEIGCRR PRFFKIIHNA IIQDGNLKIP  60
PEFFMNYGAD SHHATLEVPD GLTWDVQLKR NSNGGNAAVS FQIGQLAQFF EYYSIRPGHV  120
LLFKYHGNSH FHVVIFDTSA GEINYPADSS NDEVHFHGYH EGGPSDIKSS EEEEDYCAHA  180
STDEDETSAS SEEEEVRVFG KNKRKHVYLR TKEEEDRARR RAKQRATLIG DEFQSENPFF  240
TIALQPSYMN HKYLHIPVSF NEKHMFSHGK KIKAQVEDGR FWLLAFPKDE RGRLTIGVAS  300
LLKDNDLVVG DIILVELMKE MKSKYLDAKV HIFRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-17B3 family protein