PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390698.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 396aa MW: 44331.1 Da PI: 7.7504

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.5	1.4e-35	39	131	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++ XP_026390698.1 39 FLTKTYQLVDDPNTDHVVSWGEDDSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEKHLLCE 124 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_026390698.1 125 IHRRKTS 131 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MALMLDSNNN NNMMNNSSSC EGGSILLALD SNKSVPAPFL TKTYQLVDDP NTDHVVSWGE 60 DDSTFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVPDRWEFA NEFFRKGEKH 120 LLCEIHRRKT SQPQQVSING GGSGFYNPFT NRLSISPSDD NSDDQVSWCD SADPLLLSSP 180 QSHYQYHVAG GGGGFNMNGG GCNGNTSSIM ALSEDNERLR RSNSMLVSEL AHMKKLYNDI 240 IYFVQNHVKP AAHPSNSYSS PSPFVITNNN TSNPTSTSLV VQNKPQNYQN QNLGFNSQQP 300 IPPKQSHYHQ QQQQHHFKVP LSPNATTNNT TSSTSLPMLE EHNNNNGSSK TKLFGVSLYS 360 SKKRLHPEPP SDMDINKSRS MLSKNDLGLN LMPSSY

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MALMLDSNNN NNMMNNSSSC EGGSILLALD SNKSVPAPFL TKTYQLVDDP NTDHVVSWGE  60
DDSTFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVPDRWEFA NEFFRKGEKH  120
LLCEIHRRKT SQPQQVSING GGSGFYNPFT NRLSISPSDD NSDDQVSWCD SADPLLLSSP  180
QSHYQYHVAG GGGGFNMNGG GCNGNTSSIM ALSEDNERLR RSNSMLVSEL AHMKKLYNDI  240
IYFVQNHVKP AAHPSNSYSS PSPFVITNNN TSNPTSTSLV VQNKPQNYQN QNLGFNSQQP  300
IPPKQSHYHQ QQQQHHFKVP LSPNATTNNT TSSTSLPMLE EHNNNNGSSK TKLFGVSLYS  360
SKKRLHPEPP SDMDINKSRS MLSKNDLGLN LMPSSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-96	HSF family protein