PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026390543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | ARF | ||||||||
Protein Properties | Length: 180aa MW: 20478.6 Da PI: 9.457 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.2 | 4.6e-11 | 65 | 106 | 56 | 99 |
TTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 56 sgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++r++l++GW+ Fv+++ L +gD ++F + +++el+v+v+r+ XP_026390543.1 65 PRRHLLQSGWSVFVSSKTLVVGDAFIFL--RGENGELRVGVCRA 106 689*************************..449999******97 PP | |||||||
2 | Auxin_resp | 64.3 | 4.5e-22 | 131 | 180 | 1 | 50 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafe 50 a+ha+st+++F+v+Y+Pr+s+ eF+v++ ++++++k++ s+GmRfkm+fe XP_026390543.1 131 AWHAVSTETMFTVYYKPRTSPEEFIVPYGQYMESVKNSHSIGMRFKMRFE 180 89***********************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MPIYDLPAKI LFRVINVQLK AKADTDEVFA QVTLLPQGNQ DENLMEKENV PQSSPRPLVH 60 SFCQPRRHLL QSGWSVFVSS KTLVVGDAFI FLRGENGELR VGVCRAKRQQ GNILSSFISS 120 HSMHLGVLAT AWHAVSTETM FTVYYKPRTS PEEFIVPYGQ YMESVKNSHS IGMRFKMRFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62000.3 | 7e-88 | ARF family protein |