PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 27268.2 Da PI: 9.697 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.5 | 5.8e-14 | 72 | 118 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++N++f L ++P + kK++Ka++L A++Y+k+Lq XP_026390428.1 72 DHVMAERKRRQKLNQRFIALSAVVPGL-----KKMDKASVLGDAIKYLKQLQ 118 599************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDSLQALQVC GNVVGDHVNP REEVVSPGNK KMMFPSDVSY LNVVNSASKG NQHGKKSTVA 60 AMINNQQSCT KDHVMAERKR RQKLNQRFIA LSAVVPGLKK MDKASVLGDA IKYLKQLQEK 120 AKTLEEQTTK KTVESVIFLK KTQIYADDKN SSSSNENSVA GSTYDEPLPE IEARVSHNNV 180 LIRIHCEKHN GVFAKVLSQI EKLHLSVINS NAIPFDDSSL AITIAAQMNA EYSMTVKDLV 240 KSLRSVV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 82 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 2e-56 | bHLH family protein |