PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026390405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 28475 Da PI: 6.677 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.5 | 4.9e-08 | 150 | 190 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P a K++ a++L +Av+Y+k L XP_026390405.1 150 ARHRRERISERMRILQRLVPGgA------KMDTASMLDEAVRYVKFL 190 699*****************966......****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MDTTRHDSMP RNNTWDNLVM ASMEQSTPIS TPYLHDDQLA YDVIFENFHS QQITQPTSSC 60 SSHYAPIHSD HHEHQQQQLI RTLSYCSEEK KQEKCEKGSS EEEEEEELDA MKEMMYRIAA 120 MQPIDIDPAT LSKPKRRNVR ISNDPQSVAA RHRRERISER MRILQRLVPG GAKMDTASML 180 DEAVRYVKFL KKQVIKLQSS NQNSPRLAVP IINDDYRWHV PSSENNIVTF TETTPQKAKD 240 YCIPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G09750.1 | 6e-39 | bHLH family protein |