PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390364.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 586aa    MW: 66435.3 Da    PI: 6.5601
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS44.72.2e-1472144173
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn 73 
                     +++lL++cAe vs++d+++a++l++ ls+ ++p gd+++Rl++ f +AL+ r++r+ +++  a ++ +  ++n
  XP_026390364.1  72 MRKLLISCAELVSQSDFSAAHRLVSLLSTSSTPFGDSTERLVHQFSKALSLRINRHHNNTNTATATANFIRSN 144
                     589****************************************************888777776666555544 PP
2GRAS326.93.9e-10022958572373
            GRAS  72 knsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg.....................ppslRiT 145
                     +n+ +  +++ ++++++P+++fshltaNqaIlea+eg+e +Hi+Dfd +qG+QWp+L+qa+a+R                        pp++RiT
  XP_026390364.1 229 DNHGDLQSSYLYLNQITPFIRFSHLTANQAILEAIEGQESIHILDFDTMQGVQWPPLMQAIADRYYTssslsssdttptssslphppvPPMIRIT 323
                     446667788899****************************************************944457888999******************* PP

            GRAS 146 gvgspesgskeeleetgerLakfAeelgvpfefnvl.....vakrledleleeLrvkpgEalaVnlvlqlhrll..................... 214
                     g g+    + ++l++tg+rL++fA++lg++f+f++l       ++++   ++++++ p+E+laVn+vl lh+ll                     
  XP_026390364.1 324 GTGQ----DIDTLRKTGDRLQRFAQSLGLRFQFHPLilllnDPSSVALQLPSAIALLPHETLAVNCVLYLHKLLsstdddhhhhphdqqyynqqq 414
                     ****....9**************************97743222244444678899999************************************* PP

            GRAS 215 ..........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                               +++ + ++    +L+++ks++Pkvv+v+e+ea+ n+++F++rf+eal++y+alf+slea+lp++s+er +vE++++grei ++v+
  XP_026390364.1 415 nttryyysssSSRRDDDDGVCLFLRTIKSMNPKVVTVAEREASNNHPNFMKRFVEALDHYTALFNSLEATLPPNSQERLTVEQVWFGREIADIVS 509
                     ******9765333444446778************************************************************************* PP

            GRAS 300 cegaerrerhetlek.WrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +eg+errer e+le+ W e+l+++GF+ +pls +a +qaklllr ++ s+gy+++  ++s++lgW++++L++vS+W
  XP_026390364.1 510 AEGEERRERYERLESyWVEKLTSSGFTRLPLSPYALSQAKLLLRLHYpSEGYQLQILNDSFFLGWQNQSLFTVSSW 585
                     ************9866************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MLSSSSFSTD GNNNSHEDNK DQDRHRTLDH RHQGGGHDLS PASYQLPQYD HHQLQTTVSS  60
HLRHEDQNHH QMRKLLISCA ELVSQSDFSA AHRLVSLLST SSTPFGDSTE RLVHQFSKAL  120
SLRINRHHNN TNTATATANF IRSNLLTDSD HHHHHHHHHH HHQYYSAPIV AGASASAASR  180
TTSTIAVVNL IDNPSVSTSA SDAVDLGHHQ IHELHNDEVV AIDHDINNDN HGDLQSSYLY  240
LNQITPFIRF SHLTANQAIL EAIEGQESIH ILDFDTMQGV QWPPLMQAIA DRYYTSSSLS  300
SSDTTPTSSS LPHPPVPPMI RITGTGQDID TLRKTGDRLQ RFAQSLGLRF QFHPLILLLN  360
DPSSVALQLP SAIALLPHET LAVNCVLYLH KLLSSTDDDH HHHPHDQQYY NQQQNTTRYY  420
YSSSSSRRDD DDGVCLFLRT IKSMNPKVVT VAEREASNNH PNFMKRFVEA LDHYTALFNS  480
LEATLPPNSQ ERLTVEQVWF GREIADIVSA EGEERRERYE RLESYWVEKL TSSGFTRLPL  540
SPYALSQAKL LLRLHYPSEG YQLQILNDSF FLGWQNQSLF TVSSWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.18e-97GRAS family protein