PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390241.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 403aa MW: 44135.2 Da PI: 8.4612

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F+ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_026390241.1 57 KPRWNPKPEQIRILEAIFNAgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.5	4.4e-36	56	119	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe+++++G+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq XP_026390241.1 56 PKPRWNPKPEQIRILEAIFNAGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 119 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MASSNRHWPS MFKSKPCDSH PQWQHEINPS SLMSSCQRPS YTPSAPAGNE ERTLEPKPRW 60 NPKPEQIRIL EAIFNAGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKQR 120 HSTKSSSSIN NIYHQPSPKT LTAPSSSSSS SSEKSSPKKT GNNKKNIAAM GTTGVNFVDA 180 LNSPTDSVNQ TYFQTTQGEL ISSSPDPFFF SATMPVQQSG IGSTGFTQGF CFSELPNVIQ 240 YPSQNHHQGI GQCSSLLLGE LLHHGSTLKK DEAVDKLKDW QKLSYTTTSI TSTSTIPSTV 300 IDTIPSSTIT STTTGSTLIH DIQGGGGIGE SGDIGPCIVA KSTVFINDIE FEVSMGPLNV 360 RQAFGYDAVL IHSSGQPVFT NEWGFTLQSL QPGASYYLVR IFS

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MASSNRHWPS MFKSKPCDSH PQWQHEINPS SLMSSCQRPS YTPSAPAGNE ERTLEPKPRW  60
NPKPEQIRIL EAIFNAGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKQR  120
HSTKSSSSIN NIYHQPSPKT LTAPSSSSSS SSEKSSPKKT GNNKKNIAAM GTTGVNFVDA  180
LNSPTDSVNQ TYFQTTQGEL ISSSPDPFFF SATMPVQQSG IGSTGFTQGF CFSELPNVIQ  240
YPSQNHHQGI GQCSSLLLGE LLHHGSTLKK DEAVDKLKDW QKLSYTTTSI TSTSTIPSTV  300
IDTIPSSTIT STTTGSTLIH DIQGGGGIGE SGDIGPCIVA KSTVFINDIE FEVSMGPLNV  360
RQAFGYDAVL IHSSGQPVFT NEWGFTLQSL QPGASYYLVR IFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-55	WOX family protein