PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389968.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 365aa    MW: 41202.6 Da    PI: 6.4581
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.8e-10269310854
                     HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P  a      Kl+ a++L +Av+YIk L
  XP_026389968.1 269 AARHRRERISERIRVLQRLVPGgA------KLDTASVLDEAVRYIKFL 310
                     6799*****************966......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MPTALPTDWN FSLGVLGGYL LADHYDKDSK TSDILLLKKK EDGSLSWIEE FSISNTDTQE  60
IVQDSLVLTG RGTVLCHSET KVLIHDLNSS SSKVLVDFGK DKRIFQAIPH MSTLVSSKAL  120
GEANTKTMET VDVPRKNTWD NLVMASVEQS NTIATPYLHG DQLAYDVIFE NFHSQPVTQP  180
ASSCSSHYAP IHSDHEHQQQ QQLIRTISCS EEKKQVKGEE GSEEEEELGA VKEMMYLITA  240
MQPIDIGPVT LDKPKRRNIR VRNDPHLVAA RHRRERISER IRVLQRLVPG GAKLDTASVL  300
DEAVRYIKFL KKQVFKLQSS NQNSPRIAVP IINDEYHWHV PSSENNIFTF METMPLSVNQ  360
GLFHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-28bHLH family protein