PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026389409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Whirly | ||||||||
Protein Properties | Length: 245aa MW: 27207.1 Da PI: 10.0264 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 173.1 | 6.1e-54 | 61 | 199 | 2 | 139 |
Whirly 2 vyktkaalkvkavrptfealdsg.nlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 ++k+k+al++ ++ p+f +l+sg +k++r+G+++l++ +a++++kydW+++q fals+te++ l++l++ es+effhdp++++sn+G+vrk l+ XP_026389409.1 61 IFKGKGALNMSPIPPKFIQLQSGgGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLS 155 9******************9875279********************************************************************* PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 v+P+ +G+G+ ++l+v+ns+ k+ ++f+vPvskaef v+rs ++ XP_026389409.1 156 VQPIGNGAGFSFSLNVNNSVSKTSDQFYVPVSKAEFEVMRSSFN 199 ****************************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MLKKFSQVLT VRRPLSKFLL PRKVSNTEDA LLSRSFVSQA VARPNPASDG DSGRVFVDYT 60 IFKGKGALNM SPIPPKFIQL QSGGGMKIDR KGAMMLNFFP AVGPKKYDWQ NRQGFALSVT 120 EIGALISLGP SESAEFFHDP SMQSSNAGQV RKKLSVQPIG NGAGFSFSLN VNNSVSKTSD 180 QFYVPVSKAE FEVMRSSFNY ILPRIMGWDQ LFNPQLPASA NVNPEIREPE MEPEMHLSPD 240 PEWDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 5e-64 | Whirly family protein |