PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389121.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 687aa MW: 78144.8 Da PI: 6.9623

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.1	7.1e-19	49	136	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++YneYA+++GF+vr+ +++ + + ++i ++ +vCs+eg+ + +k r++r+++r +C a +++k+++ +k+ ++++++eH+Hel XP_026389121.1 49 DYYNEYARKIGFRVRILRTNAKkGQRDKIHRQVLVCSCEGSYKMVRKP----RKRRETKRFECMAVFEIKLMSgGDKYALIRFKSEHTHELG 136 69***********987776635666799999*****998877....999**************99*************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MDSSETIPDL DSNDDKGDSA EAELRFCDLD ELVEPKVGMI FDTAKEALDY YNEYARKIGF 60 RVRILRTNAK KGQRDKIHRQ VLVCSCEGSY KMVRKPRKRR ETKRFECMAV FEIKLMSGGD 120 KYALIRFKSE HTHELGPTKI SRHLKTPAHV PHVDSSLPRG VTAADIPEEV GLSDLNARSG 180 FLKRGDAHFL LEYFRQKKQE NKHFFYSFRT NGDGSICGVF YCDAKSRRDY GIYGDAVCFD 240 TTFKTNDMVC VPVIGINNHG QPALFGCGLL DGETADSAVW LFTTFLEAMG GKKPISVFTS 300 ESAFILNAVS AVFPEAHHGL CLWHLFQSAS KHLTEVFKAF KSFSVQFKAC IYDPETIEEF 360 EESWSKLLDE YGLRGTGENI SKFLKAYFST GSIPLWEFVD QYSKAMVDQY EKEKEAEKRT 420 HQTEPNLISA WPIEHEASKL YTREMFYGFQ EELQQIIDLL LELVSDDGII RTYRATEMEG 480 QKKIRTLIYN HTEQSVYCSC KKFEFNGILC SHALKLFRNL QYKTLPPKYY LKRWTRKATE 540 DDVFDPSGEL IPNNSDPSST ALYDALLQIS QRIATKCSKS EEVFSLTKLL LQEVEAKMEG 600 RNTMEERRPA VQKATIKTTS AVQTTTIETT PAVQKTTIKT TPAVQKTTIE TTPAVQKTTI 660 ETTPAVQKTT IETTPAVQKT TIETNYN

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MDSSETIPDL DSNDDKGDSA EAELRFCDLD ELVEPKVGMI FDTAKEALDY YNEYARKIGF  60
RVRILRTNAK KGQRDKIHRQ VLVCSCEGSY KMVRKPRKRR ETKRFECMAV FEIKLMSGGD  120
KYALIRFKSE HTHELGPTKI SRHLKTPAHV PHVDSSLPRG VTAADIPEEV GLSDLNARSG  180
FLKRGDAHFL LEYFRQKKQE NKHFFYSFRT NGDGSICGVF YCDAKSRRDY GIYGDAVCFD  240
TTFKTNDMVC VPVIGINNHG QPALFGCGLL DGETADSAVW LFTTFLEAMG GKKPISVFTS  300
ESAFILNAVS AVFPEAHHGL CLWHLFQSAS KHLTEVFKAF KSFSVQFKAC IYDPETIEEF  360
EESWSKLLDE YGLRGTGENI SKFLKAYFST GSIPLWEFVD QYSKAMVDQY EKEKEAEKRT  420
HQTEPNLISA WPIEHEASKL YTREMFYGFQ EELQQIIDLL LELVSDDGII RTYRATEMEG  480
QKKIRTLIYN HTEQSVYCSC KKFEFNGILC SHALKLFRNL QYKTLPPKYY LKRWTRKATE  540
DDVFDPSGEL IPNNSDPSST ALYDALLQIS QRIATKCSKS EEVFSLTKLL LQEVEAKMEG  600
RNTMEERRPA VQKATIKTTS AVQTTTIETT PAVQKTTIKT TPAVQKTTIE TTPAVQKTTI  660
ETTPAVQKTT IETTPAVQKT TIETNYN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	101	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-96	FAR1 family protein