PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389006.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 629aa MW: 68960.7 Da PI: 8.0834

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	6e-33	256	313	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k XP_026389006.1 256 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-EGQITEIVYKGSHNHPK 313 7**************************************.*************85 PP
2	WRKY	105.5	2.8e-33	453	511	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_026389006.1 453 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSNGCPVRKHVERASHDLRAVITTYEGKHNHD 511 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MTSSGGGGSS GLDTTSTIEY PNFSFSTSNS NSTNHQFMNS SSFSDLLATN NYTTDSTFSN 60 RGSGGYADRI GSGGGAIPKF KSTPPPSLPI SPPSLAVSPS SYFSIPPGLS PAELLDSPGL 120 LSSSNILPSP TTGSFPAHNP SFNWRSNSQQ SNNNNTIKQE TERRNTNNYS IVTSSSFSLP 180 SSNDFSFQTQ SWNSNSISSD NHNQRNIVKS EFPPPLLQGF SSLPPDHQFS SSSSTTTQQI 240 QPPIHHQTLR EKRRSEDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERSLEGQI 300 TEIVYKGSHN HPKPTSTRRS SSSSLQSSTS LPSSHQQQPP LSSSSSIVVS ALPISSDNHH 360 GGNSSSQMEL VTTPENSSNI SIGEEVDFDH SSDHKSKSNG DEFDDHHDQE PEAKRWKREN 420 EYEGEGISAP PAGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT 480 SNGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSGM HRQQQSAAAT TTMGSSHNNG 540 SSVVRPYTTS LVNNVNTNNN HSYRNDNQGG QAPFTLEMLQ TSPGSFGFSG FSMNTNNNNS 600 FMNNQQQQGV FSKTKDEPRD DMFLESLLF

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MTSSGGGGSS GLDTTSTIEY PNFSFSTSNS NSTNHQFMNS SSFSDLLATN NYTTDSTFSN  60
RGSGGYADRI GSGGGAIPKF KSTPPPSLPI SPPSLAVSPS SYFSIPPGLS PAELLDSPGL  120
LSSSNILPSP TTGSFPAHNP SFNWRSNSQQ SNNNNTIKQE TERRNTNNYS IVTSSSFSLP  180
SSNDFSFQTQ SWNSNSISSD NHNQRNIVKS EFPPPLLQGF SSLPPDHQFS SSSSTTTQQI  240
QPPIHHQTLR EKRRSEDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERSLEGQI  300
TEIVYKGSHN HPKPTSTRRS SSSSLQSSTS LPSSHQQQPP LSSSSSIVVS ALPISSDNHH  360
GGNSSSQMEL VTTPENSSNI SIGEEVDFDH SSDHKSKSNG DEFDDHHDQE PEAKRWKREN  420
EYEGEGISAP PAGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT  480
SNGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSGM HRQQQSAAAT TTMGSSHNNG  540
SSVVRPYTTS LVNNVNTNNN HSYRNDNQGG QAPFTLEMLQ TSPGSFGFSG FSMNTNNNNS  600
FMNNQQQQGV FSKTKDEPRD DMFLESLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-74	WRKY family protein