PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388669.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 1088aa MW: 121294 Da PI: 7.7536

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388669.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.3e-41	165	242	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ dls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ XP_026388669.1 165 MCQVDDCKGDLSNAKDYHRRHKVCEVHSKTTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 242 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MEDVGAQIAH PMYIHQSLPG RFCEAPNMAR KRDLPWQNPM FIQQQQQQQQ FQQQQQRFQN 60 SKGNWNPNGW NWDHVTFVGK PSDAEVMQIR PAATPMVVQE QKSKVEENRI PVAMKKDSVD 120 EENLTLKLGG NLYSTEDNAS RPNKRVRSGS PGGGGAAAAG GNYPMCQVDD CKGDLSNAKD 180 YHRRHKVCEV HSKTTKALVG KQMQRFCQQC SRFHPLSEFD EGKRSCRRRL AGHNRRRRKT 240 QPEDVSSRMV IPGNQDNPSN GNLDVVNLLT AIARLQGNNV EKSVPDKDRL IQILSKMAMP 300 PVPSNSVTRN SLPGNFDLNV SQEVSSEHQN KMTGGRNTPV PSTMDMLTVL STLAASSPDA 360 LAFLSQRSSI SSENDKTKVN CLEKAADQNL PRQPVPGFSS AGGERSSTSY QSPVEVSDGH 420 AQGTQPSLQL QLFSSSPEND SPPKMGSAYK YFSSDSSNPM ESPSSSPPVV QKFFPMQTTS 480 EIMKHERMSI SGEDNGAVEA STTRGWSSPL ELFKGPKGRV ENRSVQNVPY QGGYASSSGS 540 DHSPSSSNSD AQNRTGRIIF KLFDKDPSSF PGTLRNQILE WLSHSPSEME SYIRPGCVIL 600 SIYVSMPCTA WDQLQEDLLQ RVNFLVRDLD PGFWSNGRFL VHTDRQLASH KDGKIRLCKS 660 WRTWSAPEIM SVSPLAVVCG QETSLMLRGR NLSVPGTKIH CTYKGGYLSK EVLGSEGTVY 720 DDTSSESFDF PSGFPTVLGR CFIEVENGFK GNSFPVIIAD AAICHELRLL EFEFKEDGRV 780 GDNASEDQMQ DSECPRSRED CLYFLNELGW LFQRMNSTYS DCPSFSHTRF KFLITFSIER 840 DWCTLIKTLL DILVERNPGK DGLSKDSLEM LSEVHLLNRA VKRKCRKMVD LLIHYFVSSS 900 TDSSKKYLFP PNQTGPGGIT PLHLAACTLD SKEMVDALTN DPQEIGLNCW NSLLDTNGQS 960 PFDYASARNN HYYNRLVSRK LIDRKRGQVS ISVMEEDTSL DNSWIVAEES VKATPHPTET 1020 KPCGKCSIAA TRYYKRMPGY QGLLHRPYVH SMLAIAAVCV CVCLFLRGSP DIGSVAPFKW 1080 ENLHFGTS

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MEDVGAQIAH PMYIHQSLPG RFCEAPNMAR KRDLPWQNPM FIQQQQQQQQ FQQQQQRFQN  60
SKGNWNPNGW NWDHVTFVGK PSDAEVMQIR PAATPMVVQE QKSKVEENRI PVAMKKDSVD  120
EENLTLKLGG NLYSTEDNAS RPNKRVRSGS PGGGGAAAAG GNYPMCQVDD CKGDLSNAKD  180
YHRRHKVCEV HSKTTKALVG KQMQRFCQQC SRFHPLSEFD EGKRSCRRRL AGHNRRRRKT  240
QPEDVSSRMV IPGNQDNPSN GNLDVVNLLT AIARLQGNNV EKSVPDKDRL IQILSKMAMP  300
PVPSNSVTRN SLPGNFDLNV SQEVSSEHQN KMTGGRNTPV PSTMDMLTVL STLAASSPDA  360
LAFLSQRSSI SSENDKTKVN CLEKAADQNL PRQPVPGFSS AGGERSSTSY QSPVEVSDGH  420
AQGTQPSLQL QLFSSSPEND SPPKMGSAYK YFSSDSSNPM ESPSSSPPVV QKFFPMQTTS  480
EIMKHERMSI SGEDNGAVEA STTRGWSSPL ELFKGPKGRV ENRSVQNVPY QGGYASSSGS  540
DHSPSSSNSD AQNRTGRIIF KLFDKDPSSF PGTLRNQILE WLSHSPSEME SYIRPGCVIL  600
SIYVSMPCTA WDQLQEDLLQ RVNFLVRDLD PGFWSNGRFL VHTDRQLASH KDGKIRLCKS  660
WRTWSAPEIM SVSPLAVVCG QETSLMLRGR NLSVPGTKIH CTYKGGYLSK EVLGSEGTVY  720
DDTSSESFDF PSGFPTVLGR CFIEVENGFK GNSFPVIIAD AAICHELRLL EFEFKEDGRV  780
GDNASEDQMQ DSECPRSRED CLYFLNELGW LFQRMNSTYS DCPSFSHTRF KFLITFSIER  840
DWCTLIKTLL DILVERNPGK DGLSKDSLEM LSEVHLLNRA VKRKCRKMVD LLIHYFVSSS  900
TDSSKKYLFP PNQTGPGGIT PLHLAACTLD SKEMVDALTN DPQEIGLNCW NSLLDTNGQS  960
PFDYASARNN HYYNRLVSRK LIDRKRGQVS ISVMEEDTSL DNSWIVAEES VKATPHPTET  1020
KPCGKCSIAA TRYYKRMPGY QGLLHRPYVH SMLAIAAVCV CVCLFLRGSP DIGSVAPFKW  1080
ENLHFGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein