PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026388616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 705aa MW: 78242.8 Da PI: 7.0293 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.1e-16 | 345 | 404 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_026388616.1 345 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 404 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.5 | 1.8e-14 | 449 | 498 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026388616.1 449 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 498 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 705 aa Download sequence |
MKSMSNDSNG NSNNNNNSSS NNNWLGFSLS PHMTMEVPSE THHHTNNQQH HHQISSTATV 60 SNNTVPTSFF LSPPHMNNSE ICYGVGTCHE NSGYYSHLSV MPLKSDGSLC IMEALSRSQS 120 EGMVPTSSPK LENFLGSGAM GNPHHYGNSE RETMALSLDS MYYHQNTETQ NNRQQPQQHS 180 LNFLQQPQDH HIQVQQHTYY SGLTGHEIYQ TSLEEENKGT HLSNSSLQLP PMGEDGISGL 240 KNWVARHYPT NNSSMEQKMN TAGCLNNDGS GSGSVNAMGY GDLQSLSLSM SPGSQSSCIT 300 ASQQISPTGT AECVAMETNK RGSSKMGQKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE 360 AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQDEL 420 EEMKNMSRQE YVAHLRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 480 TQEEAAEAYD IAAIKFRGVN AVTNFDITRY DVERISASNT LLAGELAKRH KDVEPVVEVV 540 EQHSSVQNGG EGNLPEENAA GPDWKMVRNH SQQQQHQLQQ QQQQQQTASV ENLEHKPFGT 600 NNYRNLPFSM SLHDLIGIDA MNSNQQGLED SNRSSAHLSN TSSLVTSLSS SREGSPEKNG 660 LFGGQSSNSN KFSPSSANSW IPSAQLKPTA ITMAHLPMFA AWTDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-127 | AP2 family protein |