PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388614.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 708aa MW: 78623.2 Da PI: 7.1108

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.8	4.1e-16	345	404	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_026388614.1 345 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 404 78*****************988886678446***********************98 PP
2	AP2	38.1	3.8e-12	449	501	3	55
AP2 3 ykGV...rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV +++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026388614.1 449 YRGVtrsHRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 501 9988888999999988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MKSMSNDSNG NSNNNNNSSS NNNWLGFSLS PHMTMEVPSE THHHTNNQQH HHQISSTATV 60 SNNTVPTSFF LSPPHMNNSE ICYGVGTCHE NSGYYSHLSV MPLKSDGSLC IMEALSRSQS 120 EGMVPTSSPK LENFLGSGAM GNPHHYGNSE RETMALSLDS MYYHQNTETQ NNRQQPQQHS 180 LNFLQQPQDH HIQVQQHTYY SGLTGHEIYQ TSLEEENKGT HLSNSSLQLP PMGEDGISGL 240 KNWVARHYPT NNSSMEQKMN TAGCLNNDGS GSGSVNAMGY GDLQSLSLSM SPGSQSSCIT 300 ASQQISPTGT AECVAMETNK RGSSKMGQKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE 360 AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQDEL 420 EEMKNMSRQE YVAHLRRKSS GFSRGASMYR GVTRSHRHHQ HGRWQARIGR VAGNKDLYLG 480 TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI TRYDVERISA SNTLLAGELA KRHKDVEPVV 540 EVVEQHSSVQ NGGEGNLPEE NAAGPDWKMV RNHSQQQQHQ LQQQQQQQQT ASVENLEHKP 600 FGTNNYRNLP FSMSLHDLIG IDAMNSNQQG LEDSNRSSAH LSNTSSLVTS LSSSREGSPE 660 KNGLFGGQSS NSNKFSPSSA NSWIPSAQLK PTAITMAHLP MFAAWTDA

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MKSMSNDSNG NSNNNNNSSS NNNWLGFSLS PHMTMEVPSE THHHTNNQQH HHQISSTATV  60
SNNTVPTSFF LSPPHMNNSE ICYGVGTCHE NSGYYSHLSV MPLKSDGSLC IMEALSRSQS  120
EGMVPTSSPK LENFLGSGAM GNPHHYGNSE RETMALSLDS MYYHQNTETQ NNRQQPQQHS  180
LNFLQQPQDH HIQVQQHTYY SGLTGHEIYQ TSLEEENKGT HLSNSSLQLP PMGEDGISGL  240
KNWVARHYPT NNSSMEQKMN TAGCLNNDGS GSGSVNAMGY GDLQSLSLSM SPGSQSSCIT  300
ASQQISPTGT AECVAMETNK RGSSKMGQKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE  360
AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQDEL  420
EEMKNMSRQE YVAHLRRKSS GFSRGASMYR GVTRSHRHHQ HGRWQARIGR VAGNKDLYLG  480
TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI TRYDVERISA SNTLLAGELA KRHKDVEPVV  540
EVVEQHSSVQ NGGEGNLPEE NAAGPDWKMV RNHSQQQQHQ LQQQQQQQQT ASVENLEHKP  600
FGTNNYRNLP FSMSLHDLIG IDAMNSNQQG LEDSNRSSAH LSNTSSLVTS LSSSREGSPE  660
KNGLFGGQSS NSNKFSPSSA NSWIPSAQLK PTAITMAHLP MFAAWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-125	AP2 family protein