PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388301.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 590aa    MW: 65404.7 Da    PI: 4.6859
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.57.9e-1332215902374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lLl+cA a+s++++++a a+++ l++++s +gdp +R+aay++e+Laar+a s++ ly+al+++  +   ss++l+a+++++ev+P++kf+++
  XP_026388301.1 221 KQLLLKCAAAISEHNMKEAAAIISDLRQMVSIQGDPSERIAAYMVEGLAARMATSGQALYRALKCKVPP---SSDRLSAMQILFEVCPCFKFGFM 312
                     589*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI eav+ e+ vHiiDfdi+qG Q++ L+q+LasRp++pp++R+Tgv++pes+      le +g+ L++fAe++g++fef + +a +++++
  XP_026388301.1 313 AANGAIEEAVKDEDSVHIIDFDINQGSQYMQLIQTLASRPGKPPRIRLTGVDDPESVqrTVGGLEIIGQLLENFAESVGISFEFLP-LAAKTSEV 406
                     *******************************************************99778889***********************.5999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++ +Lr++p+Eal+Vn+++qlh+++desvs+ ++rd++L++vk+l Pk+v+vveq++++n+++F  rf+ea  yy a+f+sl+a+l+r+s +r++
  XP_026388301.1 407 TPGMLRCQPKEALIVNFAFQLHHMPDESVSTVNQRDQLLRMVKGLGPKLVTVVEQNVNTNTAPFYPRFVEAYTYYLAVFESLDATLARNSPDRMN 501
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+++l+r+ivn++aceg+er+er e ++kWr+r+++aGF + pls+++ +++k  l+++ ++ ++ ++e+g+l +gW++++Lv++SaW+
  XP_026388301.1 502 VEKQCLARDIVNIIACEGEERIERYEVAGKWRARMKMAGFVSCPLSTHVDSTIKVSLKQYCDR-FNAKQEQGALNFGWESKSLVVASAWK 590
                     *************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    
MSLFRSADQS GTTYEYVLKS GNSGLSNPIF SSDKQKFKYR PEFYSEDRYF SESPSESCPA  60
SRVEFLPSRV PATTLHPHEL SSYKLLSSSS TSAAESKSFN SSSATVHSNP YQSYPVVEYL  120
DGQSSDFAMI DYDEDVVRLK LQELERELLD DIDGDDDDFG IDPSMDFDSE WGDSFANIVL  180
PTSPKESSSS DSNISSISNN KDTQELHIAP SPGLCSPITP KQLLLKCAAA ISEHNMKEAA  240
AIISDLRQMV SIQGDPSERI AAYMVEGLAA RMATSGQALY RALKCKVPPS SDRLSAMQIL  300
FEVCPCFKFG FMAANGAIEE AVKDEDSVHI IDFDINQGSQ YMQLIQTLAS RPGKPPRIRL  360
TGVDDPESVQ RTVGGLEIIG QLLENFAESV GISFEFLPLA AKTSEVTPGM LRCQPKEALI  420
VNFAFQLHHM PDESVSTVNQ RDQLLRMVKG LGPKLVTVVE QNVNTNTAPF YPRFVEAYTY  480
YLAVFESLDA TLARNSPDRM NVEKQCLARD IVNIIACEGE ERIERYEVAG KWRARMKMAG  540
FVSCPLSTHV DSTIKVSLKQ YCDRFNAKQE QGALNFGWES KSLVVASAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein