PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387981.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 474aa MW: 53156.5 Da PI: 4.9419

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.5e-12	261	312	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_026387981.1 261 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 312 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MEREEDNYST IVAGLNDNNY AGIDYSIDQN HIHRHKQQQE NHHQTLMKQS SVRVDGENTG 60 EGKVVDYMFN NNTNITQPLV PPPQQISSGY SLDRLSFAEV MQFADFGPKL ALNQKQMMEP 120 AAANANDGIP EAEDRAGKDM GLIDPVYFLK FPVLSERSFD QQTHDGGDDV QNNLLLATPP 180 LPVRDDHVAH DPEEEDEEAR IIFSVNSSLK DRLGFLEENN THNHENIMMN SSGTEMGGVT 240 TKLNRRKRPR SVKTSEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI 300 IGGAIEFVRE LEQLLQCLES QKRRRLYGDN ATTLAPSTTT AQQLPPPMFP QLPLSSNDQI 360 NKLATAAIDV EQMGGGQLHE DTAENKSCLA DVEVKLLGVD AMVKILSRRR PGQLLKTIAA 420 LEDLELDILH TNVTTIEQTV LYSFNVKVVS ETRFTAEDIA GSIQQIFNFI HASS

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MEREEDNYST IVAGLNDNNY AGIDYSIDQN HIHRHKQQQE NHHQTLMKQS SVRVDGENTG  60
EGKVVDYMFN NNTNITQPLV PPPQQISSGY SLDRLSFAEV MQFADFGPKL ALNQKQMMEP  120
AAANANDGIP EAEDRAGKDM GLIDPVYFLK FPVLSERSFD QQTHDGGDDV QNNLLLATPP  180
LPVRDDHVAH DPEEEDEEAR IIFSVNSSLK DRLGFLEENN THNHENIMMN SSGTEMGGVT  240
TKLNRRKRPR SVKTSEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI  300
IGGAIEFVRE LEQLLQCLES QKRRRLYGDN ATTLAPSTTT AQQLPPPMFP QLPLSSNDQI  360
NKLATAAIDV EQMGGGQLHE DTAENKSCLA DVEVKLLGVD AMVKILSRRR PGQLLKTIAA  420
LEDLELDILH TNVTTIEQTV LYSFNVKVVS ETRFTAEDIA GSIQQIFNFI HASS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	262	273	RMTHIAVERNRR
2	322	326	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-113	bHLH family protein