PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387948.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 686aa    MW: 78294.3 Da    PI: 6.6017
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3733.9e-1143146842374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lL++cAeav++g+++ a++ L++l++++sp+gd+ qRla+yf+ +L+arla+s+s++y++l+ +  s   + e l+a++lf  + P+l++s++
  XP_026387948.1 314 DTLLIQCAEAVAAGNHRTASEHLNQLRQHSSPYGDASQRLAHYFADGLEARLAGSGSQIYSTLQHEMPS---VPEMLKAYQLFMVALPFLTISNF 405
                     679************************************************************999998...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+   +HiiDf+i +G+QWp+L++ L++R++g p+lRiTg++ p +g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026387948.1 406 FANQTIGYLAESVASLHIIDFGILYGFQWPCLIRRLSKRKGGLPKLRITGIELPLPGlrPAERVEETGRRLRDYAKELNVPFEYHG-IAQKWETI 499
                     ******************************************************99999***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L++++gE l+ n++ q ++l+desv ++s+rd+vLkl+++++P+++++   +  +ns+ F  rf +al ++s++fd le+ +pre++eri+
  XP_026387948.1 500 RLEDLKINKGELLIANCINQGKNLPDESVIMDSPRDSVLKLIRKMNPNIFIHGVVNGTYNSPFFISRFRDALFHFSSIFDVLETVVPRENSERIN 594
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er l+g+e+ n++aceg+er+er et+++W++r  +aGF ++pl+++++k+ak      + + + ++e+s +l+lgWk++ +++vS+Wr
  XP_026387948.1 595 IERYLFGKEAFNIIACEGSERIERPETYKQWQSRNIKAGFMQLPLNTHIMKKAKEQAISDYHKDFVIDEDSRWLLLGWKGKIMFAVSSWR 684
                     *****************************************************98766655566*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    
MDQTHHRFNT SGHSSGSSST DTSSSSNVSQ EEEFDFSDAV LNYISQMLME ENNEDKIFMS  60
QKDYLALQSA EKPFYDILGE KYPIDCNPVG QIENFTHYNG SENAVETSWI GGLNAYESLF  120
NTENVPSHFT FRGEAAPRLS YNNPPNNFIS VVEGLGESGV GKVQVPDVHS DSEPIWQFRK  180
GVEEANKFLP DDNNLIINLE RNRFFYGRRN KEASEARDSV VHLEKDVLQN SPYWSREKKN  240
VHREDVDLEG KSSKQLAAVQ KAMFDMVLIS NDENAEKADS ILRESLKIQR SKNLHRNDGR  300
LSRGKKQSGK RDLDTLLIQC AEAVAAGNHR TASEHLNQLR QHSSPYGDAS QRLAHYFADG  360
LEARLAGSGS QIYSTLQHEM PSVPEMLKAY QLFMVALPFL TISNFFANQT IGYLAESVAS  420
LHIIDFGILY GFQWPCLIRR LSKRKGGLPK LRITGIELPL PGLRPAERVE ETGRRLRDYA  480
KELNVPFEYH GIAQKWETIR LEDLKINKGE LLIANCINQG KNLPDESVIM DSPRDSVLKL  540
IRKMNPNIFI HGVVNGTYNS PFFISRFRDA LFHFSSIFDV LETVVPRENS ERINIERYLF  600
GKEAFNIIAC EGSERIERPE TYKQWQSRNI KAGFMQLPLN THIMKKAKEQ AISDYHKDFV  660
IDEDSRWLLL GWKGKIMFAV SSWRPM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1439445RRLSKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-179GRAS family protein