PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387769.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 478aa MW: 53817.6 Da PI: 5.4227

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.7	1e-34	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws+ +nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF++++F k++k+ll++ XP_026387769.1 13 FLLKTYDMVDDSATDDIVSWSAAQNSFVVWNSPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEEFIKDQKHLLKN 98 9******************999*************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_026387769.1 99 IHRRK 103 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEGGGGGGGP APFLLKTYDM VDDSATDDIV SWSAAQNSFV VWNSPEFARL LLPTYFKHNN 60 FSSFIRQLNT YGFRKIDPER WEFANEEFIK DQKHLLKNIH RRKPIHSHTQ PQGSSGDSER 120 AVFEEEIERL TQEKSVLQTK LWRYKQQKSG VILQLEDTEK RVREMEQKQL RMMAFVEKAA 180 KNPSFVEHLI RMTESHLDLS AVNKKRRLPR VNNAPEISEI VLVGDNSCNS KADAGRVFNQ 240 DFSNRLRLEL SPAVSDCNMV SLSGQGSCED VGSSLKKKSD EDPNHANMRT QGLSFESEMI 300 EPLDVGGNGM SFTLKRVDSL SRALRVNDFP STKDDDDHIS CHLNLTLASS SLQLNNDNSA 360 RFPQFGQEAV TSSELRSSES VKETTELRVS VPNRKPADDG PRLPSSQEAP ANNHGSGAVQ 420 GRVNDVFWEQ FLTERPGSSD TEEASSSFRE NPYDEQEERN IGDGRSLRNK KDSEQLTL

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEGGGGGGGP APFLLKTYDM VDDSATDDIV SWSAAQNSFV VWNSPEFARL LLPTYFKHNN  60
FSSFIRQLNT YGFRKIDPER WEFANEEFIK DQKHLLKNIH RRKPIHSHTQ PQGSSGDSER  120
AVFEEEIERL TQEKSVLQTK LWRYKQQKSG VILQLEDTEK RVREMEQKQL RMMAFVEKAA  180
KNPSFVEHLI RMTESHLDLS AVNKKRRLPR VNNAPEISEI VLVGDNSCNS KADAGRVFNQ  240
DFSNRLRLEL SPAVSDCNMV SLSGQGSCED VGSSLKKKSD EDPNHANMRT QGLSFESEMI  300
EPLDVGGNGM SFTLKRVDSL SRALRVNDFP STKDDDDHIS CHLNLTLASS SLQLNNDNSA  360
RFPQFGQEAV TSSELRSSES VKETTELRVS VPNRKPADDG PRLPSSQEAP ANNHGSGAVQ  420
GRVNDVFWEQ FLTERPGSSD TEEASSSFRE NPYDEQEERN IGDGRSLRNK KDSEQLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-145	HSF family protein