PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387732.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 577aa MW: 63375 Da PI: 7.0402

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.7e-09	376	423	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026387732.1 376 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 423 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MEKDKYFRGN SPPQLMDIQI ASHHHEQFGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS 60 NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN 120 SPPKLNLSMM DHQLRGNLPN SAQTHHQPCA QLAPFPSDPG FAERAARLSC FGTRTFGNLS 180 SSSPSQFGLN EPELSASTYR SNNQSPSNGK LSSSQSLKAT GSHQENNNNN NCSNKDFSQL 240 QDMILDNEMR SAADRRLSSR STTPEKNAEF NQEDSSISEQ IPEIGLKVSN YHGGRKRKAA 300 SKGKAKETPA IPSTKEIKIK EDDNSEAKKS KSGDNDEKTK ADSGEGSQKS KDNQKPPEPP 360 KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV MLDEIINYVQ 420 SLQRQVEFLS MKLSTVNPRL DFNMEALLSK DVMLQPRGGS FPHPNYPIDA SVAAAFPYGH 480 QPSQHHVQNL QQQQQQNGIP NGTVNHCPLD AALQRNLGMQ LPSLDGFCES AAQLGAFWED 540 DLQSVVQMGF GQNQGQETGY HPQNSHGLPS AHMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MEKDKYFRGN SPPQLMDIQI ASHHHEQFGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS  60
NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN  120
SPPKLNLSMM DHQLRGNLPN SAQTHHQPCA QLAPFPSDPG FAERAARLSC FGTRTFGNLS  180
SSSPSQFGLN EPELSASTYR SNNQSPSNGK LSSSQSLKAT GSHQENNNNN NCSNKDFSQL  240
QDMILDNEMR SAADRRLSSR STTPEKNAEF NQEDSSISEQ IPEIGLKVSN YHGGRKRKAA  300
SKGKAKETPA IPSTKEIKIK EDDNSEAKKS KSGDNDEKTK ADSGEGSQKS KDNQKPPEPP  360
KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV MLDEIINYVQ  420
SLQRQVEFLS MKLSTVNPRL DFNMEALLSK DVMLQPRGGS FPHPNYPIDA SVAAAFPYGH  480
QPSQHHVQNL QQQQQQNGIP NGTVNHCPLD AALQRNLGMQ LPSLDGFCES AAQLGAFWED  540
DLQSVVQMGF GQNQGQETGY HPQNSHGLPS AHMKVEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	331	RKRKAASKGKAKETPAIPSTKEIKIKEDDNSEAKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	8e-70	bHLH family protein