PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387489.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 357aa MW: 40112.3 Da PI: 7.9143

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.2e-15	48	107	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n k+ ++++lg ++ +e Aa a++ a++k++g XP_026387489.1 48 SIYRGVTRHRWTGRYEAHLWDkNSWNEsqnKKgRQVYLGAYDGEEAAAHAYDLAALKYWG 107 57*****************888866656446***********************98 PP
2	AP2	51.2	3e-16	150	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_026387489.1 150 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 201 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MAKLSQQIKN NNSTSNNTST AVTVTTTATK VKRKRKSVPR DCPPQRSSIY RGVTRHRWTG 60 RYEAHLWDKN SWNESQNKKG RQVYLGAYDG EEAAAHAYDL AALKYWGRET ILNFPLATYE 120 EEIKEMEGQS KEEYIGSLRR RSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG 180 TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKWLRPN NNKSSVTNTD TKPVVVHPST 240 HDDLMNSSTQ HSPSEVAAVY QPRQNGASSA KSSSALGLLL QSSKFKEMLE RTSSEESTEE 300 CPLTPAESDP PKCSFPDDIQ TFFECQDSGS YVEGEDNIFG DLNSSSFSPI FDCELGA

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MAKLSQQIKN NNSTSNNTST AVTVTTTATK VKRKRKSVPR DCPPQRSSIY RGVTRHRWTG  60
RYEAHLWDKN SWNESQNKKG RQVYLGAYDG EEAAAHAYDL AALKYWGRET ILNFPLATYE  120
EEIKEMEGQS KEEYIGSLRR RSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG  180
TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKWLRPN NNKSSVTNTD TKPVVVHPST  240
HDDLMNSSTQ HSPSEVAAVY QPRQNGASSA KSSSALGLLL QSSKFKEMLE RTSSEESTEE  300
CPLTPAESDP PKCSFPDDIQ TFFECQDSGS YVEGEDNIFG DLNSSSFSPI FDCELGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	4e-97	AP2 family protein