PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387371.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family BBR-BPC
Protein Properties Length: 301aa    MW: 33478.2 Da    PI: 10.4649
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind287.75.1e-8833018301
       GAGA_bind   8 e.rnkg.yyepaaslkenlglqlmssiaerdaki...........rernlalsekkaavaerd........................maflqrdk 65 
                     + rn+  yyep    + + gl+l s   erd+k+           r++++        + + +                         +    d 
  XP_026387371.1   3 NlRNWHgYYEPP--HRGHSGLNLSSPT-ERDTKPlfnnqhgggigRNHQV--------MVNNNmnnggvyhphrvvdmgmpethlphLNTSSVDF 86 
                     2389987***98..6889999986665.9*****9987666666633322........2222233333333345899999999999988888999 PP

       GAGA_bind  66 alaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpk 160
                     +l++r++  v+ + + l+ + + ns       g +  sg++ ++ + q      +++a +++++ ++e++pi+ + + +k       r  ++ +k
  XP_026387371.1  87 WLNQRQDVKVNMNGNHLNHMNHINS-----YGGLSEASGSHGLQIIPQ------QPEALKVERMVTMEEPPINVNGPLKK-------RPGGRAQK 163
                     ***9776666555444444433333.....123344445555555544......67777777777788888766544443.......34455566 PP

       GAGA_bind 161 ekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRi 255
                     ++k kk+k+  +k+++   ++   + s+  +ks+++++ng+++D s +P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRi
  XP_026387371.1 164 SPKPKKPKRVVPKDEDGIPTQ---RASRPARKSMGVNINGIDIDLSVIPIPVCSCTGAPQQCYRWGCGGWQSACCTTSISMYPLPMSNKRRGARI 255
                     777777777555554444444...469******************************************************************** PP

       GAGA_bind 256 agrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     agrKmSqgafkk+LekLa+eGy+ls p+DL++hWAkHGtnkfvtir
  XP_026387371.1 256 AGRKMSQGAFKKVLEKLATEGYNLSSPIDLRTHWAKHGTNKFVTIR 301
                     *********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDNLRNWHGY YEPPHRGHSG LNLSSPTERD TKPLFNNQHG GGIGRNHQVM VNNNMNNGGV  60
YHPHRVVDMG MPETHLPHLN TSSVDFWLNQ RQDVKVNMNG NHLNHMNHIN SYGGLSEASG  120
SHGLQIIPQQ PEALKVERMV TMEEPPINVN GPLKKRPGGR AQKSPKPKKP KRVVPKDEDG  180
IPTQRASRPA RKSMGVNING IDIDLSVIPI PVCSCTGAPQ QCYRWGCGGW QSACCTTSIS  240
MYPLPMSNKR RGARIAGRKM SQGAFKKVLE KLATEGYNLS SPIDLRTHWA KHGTNKFVTI  300
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.19e-71BBR-BPC family protein