PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387368.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-X1

Protein Properties

Length: 1155aa MW: 124706 Da PI: 8.2191

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.4	2e-05	352	369	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+k+CH+GpC +C XP_026387368.1 352 CGRHHCNKICHTGPCESC 369 *****************9 PP
2	zf-NF-X1	21.2	6.4e-07	416	433	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H+C++ CH+G+C++C XP_026387368.1 416 CGNHTCGEVCHPGQCGEC 433 ****************** PP
3	zf-NF-X1	18.5	4.2e-06	568	586	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC XP_026387368.1 568 CGQHSCESLCHSGHCPPCL 586 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1155 aa Download sequence
MSFQVRNDNR REGSRIPVRN SNNNRQTWIP RGGAVIGSGG GGGGAGGSGS SAILETPPPP 60 PSSSYFNNSI PNGGRYGGNF NNNYNGNPTG GGGYGGSGSS YYNVNNSVPS GGGYGGGGGG 120 NSYHNESRSR GNFTHQHHQR SNVSRPVNNP RKEKVEKPAQ VSKSLNSNLP QLVQEIQDKL 180 TKGTVECMIC YDMVRRSAPI WSCSSCYSIF HMNCIKKWAR APTSVDLSAE KNQGLNWRCP 240 GCQSVQLLTS KEIRYLCFCG KRPDPPSDLY LTPHSCGEHC GKPLEKQLQN GDDEDRCPHA 300 CVLQCHPGPC PPCKAFAPAR KCPCGKKMIT TRCSDRKSVL TCGQLCHKVL ECGRHHCNKI 360 CHTGPCESCE VPMDASCFCK KKKEVVLCGE MSVKGELIGG GGVFSCNSIC SKTLVCGNHT 420 CGEVCHPGQC GECELMPGNI KSCPCGKTLL QKERVSCLSP IPTCSNTCDK TLPCQIHRCK 480 ETCHVGVCSP CVVTVNQKCR CGSSSRFAEC YKKEKDTFTC EKSCGRKKNC GRHRCSERCC 540 PLSNSNTRYS GDWDPHLCSM ICGKKLRCGQ HSCESLCHSG HCPPCLETIF TDLTCACGKT 600 SIPPPQPCGT PAPSCQQLCS VPQPCGHAST HGCHFGDCPP CSFPVAKECI GGHVILRNIP 660 CGSKEIRCNQ LCGKTRQCGM HACSRTCHPP PCDTSCTSTS GSRSTCGQVC GAPRRDCKHT 720 CTSSCHPSSP CPERRCEFPV TITCLCGRIS ATVPCDAGGN TGGFASDTVF EAQLIHKLPV 780 PLKPVEANGN KVPLGQRKLV CDDECVKMER QRKLADAFKV PLLNLEALHL GDQSVISEQL 840 QDLFRREPKW VLSIEERCKF LVLGKGKGNT SNGLRVHVFC AMVKEKRDAV RQIAGRWKLS 900 VHSAGWEPKR FLIVHVTTKS KAPARILGVK GSSVPLTASN PPAFDPLVDM DQRLVVALLD 960 LPRESNVNAL VLRFGGECEL VWLDEFNALA IFSDPGRAAT ALRRLDHGSA YHGAAVVIAP 1020 TVTNVWGTSK EVGSAGAPKA NSWKKAVVQE ASWGEDSWGV DQNWINNPAD VQNAVWRGME 1080 TPITASINRY DVLDQDSVSK SSAVLSSGGV ERRPGNYQIG SSSTSTEPKQ EAMAGDKSDK 1140 EVVAEVVDDW EEACE

Sequence ? help Back to Top

Protein Sequence Length: 1155 aa Download sequence

MSFQVRNDNR REGSRIPVRN SNNNRQTWIP RGGAVIGSGG GGGGAGGSGS SAILETPPPP  60
PSSSYFNNSI PNGGRYGGNF NNNYNGNPTG GGGYGGSGSS YYNVNNSVPS GGGYGGGGGG  120
NSYHNESRSR GNFTHQHHQR SNVSRPVNNP RKEKVEKPAQ VSKSLNSNLP QLVQEIQDKL  180
TKGTVECMIC YDMVRRSAPI WSCSSCYSIF HMNCIKKWAR APTSVDLSAE KNQGLNWRCP  240
GCQSVQLLTS KEIRYLCFCG KRPDPPSDLY LTPHSCGEHC GKPLEKQLQN GDDEDRCPHA  300
CVLQCHPGPC PPCKAFAPAR KCPCGKKMIT TRCSDRKSVL TCGQLCHKVL ECGRHHCNKI  360
CHTGPCESCE VPMDASCFCK KKKEVVLCGE MSVKGELIGG GGVFSCNSIC SKTLVCGNHT  420
CGEVCHPGQC GECELMPGNI KSCPCGKTLL QKERVSCLSP IPTCSNTCDK TLPCQIHRCK  480
ETCHVGVCSP CVVTVNQKCR CGSSSRFAEC YKKEKDTFTC EKSCGRKKNC GRHRCSERCC  540
PLSNSNTRYS GDWDPHLCSM ICGKKLRCGQ HSCESLCHSG HCPPCLETIF TDLTCACGKT  600
SIPPPQPCGT PAPSCQQLCS VPQPCGHAST HGCHFGDCPP CSFPVAKECI GGHVILRNIP  660
CGSKEIRCNQ LCGKTRQCGM HACSRTCHPP PCDTSCTSTS GSRSTCGQVC GAPRRDCKHT  720
CTSSCHPSSP CPERRCEFPV TITCLCGRIS ATVPCDAGGN TGGFASDTVF EAQLIHKLPV  780
PLKPVEANGN KVPLGQRKLV CDDECVKMER QRKLADAFKV PLLNLEALHL GDQSVISEQL  840
QDLFRREPKW VLSIEERCKF LVLGKGKGNT SNGLRVHVFC AMVKEKRDAV RQIAGRWKLS  900
VHSAGWEPKR FLIVHVTTKS KAPARILGVK GSSVPLTASN PPAFDPLVDM DQRLVVALLD  960
LPRESNVNAL VLRFGGECEL VWLDEFNALA IFSDPGRAAT ALRRLDHGSA YHGAAVVIAP  1020
TVTNVWGTSK EVGSAGAPKA NSWKKAVVQE ASWGEDSWGV DQNWINNPAD VQNAVWRGME  1080
TPITASINRY DVLDQDSVSK SSAVLSSGGV ERRPGNYQIG SSSTSTEPKQ EAMAGDKSDK  1140
EVVAEVVDDW EEACE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein