PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387110.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 384aa    MW: 43803.4 Da    PI: 6.029
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.15.3e-2782173190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYn+YA +vGFsvrk +++ks+r++ei  r ++Cs++g r+++ k   +  +++++++ rtgCka++ ++k+k++kw+++++++eHnH+la
  XP_026387110.1  82 NFYNQYAGKVGFSVRKYSTSKSHRTNEINGRSYCCSRQGARDSRCKPieECLRKSKQTNLRTGCKAMMCIRKRKEDKWVISRIVEEHNHKLA 173
                     6******************************************99985445566788889******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MTDQSLSTDQ AIASYEYDSV DEETTIEFDR VELDDESGKG TIEEYNEAIS NEHRNENFSK  60
DGMSGICPTV GMEFDSVDEA YNFYNQYAGK VGFSVRKYST SKSHRTNEIN GRSYCCSRQG  120
ARDSRCKPIE ECLRKSKQTN LRTGCKAMMC IRKRKEDKWV ISRIVEEHNH KLAGVNERHK  180
LRSIKRIASD QRDMLQKMQQ AGLRSDLMTT FMNLEGRGSS VSSGVIGGEV RKFLSIKQQR  240
ELIEGDIEAI LHYFECQQIE NPAFFHSIQV DSEGQMTNFF WTDARARIDY HYFGDVVYLG  300
SSYGISICGL PFVPILGINH HSQAVLFGAA LLYTESEESL EWVIKTWMMS MNGKQPKVIL  360
TDQDSTVEEV IKRVLPVLRA LKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-55FAR1 family protein