PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387034.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 317aa    MW: 35658.6 Da    PI: 5.9543
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_026387034.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding49.69.3e-1670111447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++ E++  +d++++lG++ W++Ia+ ++ gRt++++k++w+++
   XP_026387034.1  70 LSESEEQMVIDLHARLGNR-WSKIASNLP-GRTDNEIKNHWNTH 111
                      5899***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGRQPCCEKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SESEEQMVID LHARLGNRWS KIASNLPGRT DNEIKNHWNT HIKKKLKKMG  120
IDPLTHQPLV PAATSTTNVD NHHVQKPNQQ YSTVIDITES GTENSQHSSM TDDDQTKGVE  180
LETNTTGNSD GFCTDEVPLI QPHEILVNCN QKNNNSSSSV TSSSASSSSS SSSSGINEEL  240
GFPNLDWPEY TNMVSGGGIW DDFNCWEYLC DDLLLDGSSR KLSVNNNNTQ HDLSFSHYDQ  300
YHRSNILEEE AWKFELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.12e-95MYB family protein