PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386719.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 474aa MW: 53412 Da PI: 8.1

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.2	1.4e-38	217	370	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........................ssssas 71 kkdrhski T++g+RdRR+Rls+++a+ fF++qd+LGfdk+skt+eWLl++ k++i el ++ + ssas XP_026386719.1 217 SKKDRHSKIVTAQGPRDRRMRLSLKVARPFFAIQDMLGFDKASKTVEWLLTNCKEEINELKRSlrisdeddtvmtaatnkrsscsrggkNVSSAS 311 69**************************************************************99999999987666666666665555556 PP TCP 72 eceaesssssasnsssgkaaksaakskksqksaasalnlakesrakarararertrekmrik 133 +ce +s+ ++ +ss+++ ++++ ++ +k++ ++ kesra arararert k+ k XP_026386719.1 312 DCEVVSEIDVSN-NSSSNNLRKEKRVRPLRKPT--FHPQRKESRAMARARARERTMGKNWSK 370 663333333222.22222333332333333333..366667************9887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MFLSNNSSIS STSSSRNNIS CGYSCCGYNN DHQHQPLFDR PLYVCPNNNN HINNNFRQSH 60 HHQPPPPSAS SPPKQSQSLT FYPFSPTYFD QNSEENDIEI LEQPYHHQEI HFNHHCLNPQ 120 QQQQQEQPLL FSSSSTTTAA ANLHTTTATL LEGGPNSTLG VANKDNITNI INKDNVDWGG 180 SGDFNKMNKK CSTNLKMNEK KLVSATWNNS KMCSSSSKKD RHSKIVTAQG PRDRRMRLSL 240 KVARPFFAIQ DMLGFDKASK TVEWLLTNCK EEINELKRSL RISDEDDTVM TAATNKRSSC 300 SRGGKNVSSA SDCEVVSEID VSNNSSSNNL RKEKRVRPLR KPTFHPQRKE SRAMARARAR 360 ERTMGKNWSK SVMPASTSNN NYLYNHNNLT MNQDMKSSLD VVAEAEEPIS HSPSLEESIV 420 ITGNSSSPAQ IFNYHHHDLV NWDIDNTNEI SSFCATSANI HLSTADFHNF DKPW

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MFLSNNSSIS STSSSRNNIS CGYSCCGYNN DHQHQPLFDR PLYVCPNNNN HINNNFRQSH  60
HHQPPPPSAS SPPKQSQSLT FYPFSPTYFD QNSEENDIEI LEQPYHHQEI HFNHHCLNPQ  120
QQQQQEQPLL FSSSSTTTAA ANLHTTTATL LEGGPNSTLG VANKDNITNI INKDNVDWGG  180
SGDFNKMNKK CSTNLKMNEK KLVSATWNNS KMCSSSSKKD RHSKIVTAQG PRDRRMRLSL  240
KVARPFFAIQ DMLGFDKASK TVEWLLTNCK EEINELKRSL RISDEDDTVM TAATNKRSSC  300
SRGGKNVSSA SDCEVVSEID VSNNSSSNNL RKEKRVRPLR KPTFHPQRKE SRAMARARAR  360
ERTMGKNWSK SVMPASTSNN NYLYNHNNLT MNQDMKSSLD VVAEAEEPIS HSPSLEESIV  420
ITGNSSSPAQ IFNYHHHDLV NWDIDNTNEI SSFCATSANI HLSTADFHNF DKPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-23	TCP family protein