PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386578.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 543aa MW: 58179.6 Da PI: 6.1508

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7e-09	359	407	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026386578.1 359 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 407 58***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MDLSEKDKFG LEKRSGDPLN YQSPNMLPSN WQFNHGNQPL GLASTSDSME KGDLMMGGSS 60 ACSSGSMMDS FTGALWGHPS SSHNLSLGDH GSSGAVMGNL GWNPLNSVTK QGIYLPPSTG 120 MLHQSLSQFP ADSGFIERAA RYSCFNGGSF SDMLNPFNVP ENLSPYSKNG GAIQGSSDVL 180 FNGLKHIPGS QSQMNEANSA ELAKDVSVSV NRGTTDGSPM KSDVKKGNFL RTPDETKGVG 240 NSGNESDDAN CSGSAGGAGR EDQSMLESAG REPSSSKGLA PKKRRRGGQV SEPDQGKSPV 300 QVTGEAANED SDSKQKDDQN PSPSAKGNKH GKDKDNSQTS DAPKEDYIHV RARRGQATNS 360 HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII NYVQSLQRQV EFLSMKLSAV 420 NPRLDLNLES LLAKDILQSR GGPSSSMGFP QDMIMAQLHP SQPGLIQSGM PGMGNPSDAL 480 RRTINSQLMA MNAGYKEPNP QMPNPWDDEL NNVIQMSFDP NGPFNGQDLN AASLPPGHMK 540 VEL

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MDLSEKDKFG LEKRSGDPLN YQSPNMLPSN WQFNHGNQPL GLASTSDSME KGDLMMGGSS  60
ACSSGSMMDS FTGALWGHPS SSHNLSLGDH GSSGAVMGNL GWNPLNSVTK QGIYLPPSTG  120
MLHQSLSQFP ADSGFIERAA RYSCFNGGSF SDMLNPFNVP ENLSPYSKNG GAIQGSSDVL  180
FNGLKHIPGS QSQMNEANSA ELAKDVSVSV NRGTTDGSPM KSDVKKGNFL RTPDETKGVG  240
NSGNESDDAN CSGSAGGAGR EDQSMLESAG REPSSSKGLA PKKRRRGGQV SEPDQGKSPV  300
QVTGEAANED SDSKQKDDQN PSPSAKGNKH GKDKDNSQTS DAPKEDYIHV RARRGQATNS  360
HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII NYVQSLQRQV EFLSMKLSAV  420
NPRLDLNLES LLAKDILQSR GGPSSSMGFP QDMIMAQLHP SQPGLIQSGM PGMGNPSDAL  480
RRTINSQLMA MNAGYKEPNP QMPNPWDDEL NNVIQMSFDP NGPFNGQDLN AASLPPGHMK  540
VEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-112	bHLH family protein