PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386555.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 588aa MW: 64387.6 Da PI: 8.4219

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54	2.9e-17	295	344	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lre++P + ++K +Ka+ L +++eYI+ Lq XP_026386555.1 295 RSKHSATEQRRRSKINDRFQILREIIPLN----DQKRDKASFLLEVIEYIQFLQ 344 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MELSQSCSFG TEGKKPTHDF LSLYNNHSSF QHQDPRPSQG IYLKTRDFLQ PLETVEKSNS 60 KGESSSIVET SSSSPVIIEK KAISQPRPPS SSSSASSIEH VLPGGIGTYT ISHISNFSQQ 120 QVVPGQERPT GSSVIAPAAP TTSYEKKTEV VVNNRAAVSN SNSSYSGGSS FTLWGDSVVE 180 KKVSSLAMMS KKGNSNGDHG QALRESVHNL GKWSSEQSLP SNPYILPNSF NSLPSSKGMS 240 HKNQSFMEMM KSAKSVHEDD DDDEEYLGKR DISSQKELTV KVDSKNIDQK ANTPRSKHSA 300 TEQRRRSKIN DRFQILREII PLNDQKRDKA SFLLEVIEYI QFLQEKVTKY EGPYQGWNQE 360 PTKLMPWRNR NGTGENMADH SRVVKNVPGP GMIFGGKFND PNIPISSTLV GNAHNVVEND 420 LTPGVSYKPM EPHLGRANKA LPLPVPIRPE LFTPAGDLAQ PIQRPTLDEE NLATGAESHL 480 RQSRSCAVAA TDVLKERDEM VVEGGTISIS NVYSQGLLNN LTKALQSSGA DLSQASISVQ 540 IDLGKQRLAA SKDHANPSAS NQTSSRSRNL NCGEDSNQAQ KRLKIENS

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MELSQSCSFG TEGKKPTHDF LSLYNNHSSF QHQDPRPSQG IYLKTRDFLQ PLETVEKSNS  60
KGESSSIVET SSSSPVIIEK KAISQPRPPS SSSSASSIEH VLPGGIGTYT ISHISNFSQQ  120
QVVPGQERPT GSSVIAPAAP TTSYEKKTEV VVNNRAAVSN SNSSYSGGSS FTLWGDSVVE  180
KKVSSLAMMS KKGNSNGDHG QALRESVHNL GKWSSEQSLP SNPYILPNSF NSLPSSKGMS  240
HKNQSFMEMM KSAKSVHEDD DDDEEYLGKR DISSQKELTV KVDSKNIDQK ANTPRSKHSA  300
TEQRRRSKIN DRFQILREII PLNDQKRDKA SFLLEVIEYI QFLQEKVTKY EGPYQGWNQE  360
PTKLMPWRNR NGTGENMADH SRVVKNVPGP GMIFGGKFND PNIPISSTLV GNAHNVVEND  420
LTPGVSYKPM EPHLGRANKA LPLPVPIRPE LFTPAGDLAQ PIQRPTLDEE NLATGAESHL  480
RQSRSCAVAA TDVLKERDEM VVEGGTISIS NVYSQGLLNN LTKALQSSGA DLSQASISVQ  540
IDLGKQRLAA SKDHANPSAS NQTSSRSRNL NCGEDSNQAQ KRLKIENS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	6e-79	bHLH family protein