PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386365.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 401aa    MW: 44566 Da    PI: 8.6633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.22.2e-16200246455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn+ ErrRRdriN+++  L++l+P++      K +Ka++Le++veY+k Lq
  XP_026386365.1 200 VHNQSERRRRDRINQKIRALQKLVPNS-----SKTDKASMLEEVVEYLKRLQ 246
                     5*************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MSSYEVAELT WENGQLSMHE LGGSVSSDPS KPLWARASGT LESIVHQATC HNPNPNMVAN  60
GRISTINPVT LSSGKKRTEN SCDNEVQIVL EPTKKRSRLQ SQSECTLTQR HNTMTANVDD  120
LQVEHSRCAS ATYLHDAKTT TTTTWTSSTS PNCSLNTKTR EDDVACATGP VTRDDQKQAK  180
SQTEAGQYQN STRRSRVAAV HNQSERRRRD RINQKIRALQ KLVPNSSKTD KASMLEEVVE  240
YLKRLQAQIH DMMSINNRTT TMAMQPQMMM PLALQQQQQQ QHQLQMSLLA ASMGMGLGMG  300
VNPAVACATP SNAQIPPQPP FLMHPMMQAH PLSASSDHHH IPNAMPVEPY YSFLAQSMNV  360
DLYNKMGAVY RQQLYHHENM AAQGNSNATS TSQANHARRN D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.12e-32bHLH family protein