PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386179.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 612aa MW: 65825.6 Da PI: 8.8518

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.3	9e-30	328	387	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ae+ +++++tYeg+Hnh+ XP_026386179.1 328 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAENMSILITTYEGTHNHP 387 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MVLVAMDTSR NNDNLTKMKR SSPSSGFGAD QGVAIKREKS TSNGSSSNNS GCENRKEVQL 60 EGGVVDSNQN KGGGNTKEKS SSPNKPSSPI QRLELISFNN LQAPKTAATV RSSATDTNSN 120 ATSSSNKNTE DDQLVSAKAE MSQVKQENER LKTTLSKVVK DYQSLQMHFF DIVQQEQTKQ 180 KSTDKTAVVV LPASTHHKEI DEEPELISLS LGRSNSAELK KFKDEKTNSS SKSKDGAGNH 240 EDDLNKGLAL GLGCKFEVSN NAARTELVTN QSSENSFEEL KEEEVVGEQW PPSKILKTVR 300 SGDDELSQQN QVKKARVSVR ARCDTPTMND GCQWRKYGQK IAKGNPCPRA YYRCTVAPAC 360 PVRKQVQRCA ENMSILITTY EGTHNHPLPI AATAMASTTS AAACMLLSGS TSSRPNFGTS 420 ATTGTSGDLN GLSFNISDNS RSRPFYIPNS SISSSPSYPT ITLDLTAPPA LSSTSASAAS 480 QFSRLSSNFP TTRYSSTSLN FSSGSESSTL PTSWGNGYLN YGNQPYNKNQ LGSLNLGRQP 540 QENFYQPYFQ KNAPPPPQQN MTESIAAATK AITSDPSFRS ALAAAITSIV NGGGVTGNQA 600 GGENIGQNLK WE

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MVLVAMDTSR NNDNLTKMKR SSPSSGFGAD QGVAIKREKS TSNGSSSNNS GCENRKEVQL  60
EGGVVDSNQN KGGGNTKEKS SSPNKPSSPI QRLELISFNN LQAPKTAATV RSSATDTNSN  120
ATSSSNKNTE DDQLVSAKAE MSQVKQENER LKTTLSKVVK DYQSLQMHFF DIVQQEQTKQ  180
KSTDKTAVVV LPASTHHKEI DEEPELISLS LGRSNSAELK KFKDEKTNSS SKSKDGAGNH  240
EDDLNKGLAL GLGCKFEVSN NAARTELVTN QSSENSFEEL KEEEVVGEQW PPSKILKTVR  300
SGDDELSQQN QVKKARVSVR ARCDTPTMND GCQWRKYGQK IAKGNPCPRA YYRCTVAPAC  360
PVRKQVQRCA ENMSILITTY EGTHNHPLPI AATAMASTTS AAACMLLSGS TSSRPNFGTS  420
ATTGTSGDLN GLSFNISDNS RSRPFYIPNS SISSSPSYPT ITLDLTAPPA LSSTSASAAS  480
QFSRLSSNFP TTRYSSTSLN FSSGSESSTL PTSWGNGYLN YGNQPYNKNQ LGSLNLGRQP  540
QENFYQPYFQ KNAPPPPQQN MTESIAAATK AITSDPSFRS ALAAAITSIV NGGGVTGNQA  600
GGENIGQNLK WE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-69	WRKY family protein