PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386167.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 543aa MW: 59914.2 Da PI: 7.0584

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.1	1.2e-16	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A++Y+ksLq XP_026386167.1 357 VHNLSERRRRDRINEKMKALQELIPHC-----NKSDKASMLDEAIDYLKSLQ 403 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MNHCVPDWSM EDDLLPSVGN QKKSMGLDHE LVELLWHNGQ VVLHSQTHRK PSPTPHEFGH 60 IQKPERQMTK GVGSFGNFGH LIQEDDTASW IHYPLEDSLD KEFFPNFFCE LPNPHPIETE 120 KQVKHYQGEK NVSFGGSEET NVLFTSSVVR SQQTGIKQSN NVNLVQNPMP PPQLKIPDSA 180 RQDPNMEGTD KIQNFSHFSK PIKAELGSSN GRTIGKGSRQ VTRVDVGESS LMTIASSHCG 240 SNQVINDADL SRVSSNALGT AGIFTGPSKE HLQMVFSHGE RGRTETLEPT VTSSSGGSGG 300 SFGGMGKQST STHSHKRKGR DVDESECPSE EAEFESAEAK KPPQRSGSNR RSRAAEVHNL 360 SERRRRDRIN EKMKALQELI PHCNKSDKAS MLDEAIDYLK SLQLQVQLMW MGGGMAPMMF 420 PGVQHYLSQM GMGMGPPLLP SMHSPMQLPR VPLVDQAISL ATAQNQPSMC PPAILNQVNF 480 QNQMQNPNFS EPYARYMGFH HMQTAQPMNM FNYGSQPMQQ GQKIGLNGLP SHGGTPSGNT 540 PSS

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MNHCVPDWSM EDDLLPSVGN QKKSMGLDHE LVELLWHNGQ VVLHSQTHRK PSPTPHEFGH  60
IQKPERQMTK GVGSFGNFGH LIQEDDTASW IHYPLEDSLD KEFFPNFFCE LPNPHPIETE  120
KQVKHYQGEK NVSFGGSEET NVLFTSSVVR SQQTGIKQSN NVNLVQNPMP PPQLKIPDSA  180
RQDPNMEGTD KIQNFSHFSK PIKAELGSSN GRTIGKGSRQ VTRVDVGESS LMTIASSHCG  240
SNQVINDADL SRVSSNALGT AGIFTGPSKE HLQMVFSHGE RGRTETLEPT VTSSSGGSGG  300
SFGGMGKQST STHSHKRKGR DVDESECPSE EAEFESAEAK KPPQRSGSNR RSRAAEVHNL  360
SERRRRDRIN EKMKALQELI PHCNKSDKAS MLDEAIDYLK SLQLQVQLMW MGGGMAPMMF  420
PGVQHYLSQM GMGMGPPLLP SMHSPMQLPR VPLVDQAISL ATAQNQPSMC PPAILNQVNF  480
QNQMQNPNFS EPYARYMGFH HMQTAQPMNM FNYGSQPMQQ GQKIGLNGLP SHGGTPSGNT  540
PSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	367	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	4e-47	bHLH family protein