PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026386135.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 566aa MW: 64366.8 Da PI: 6.2643 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.5 | 1.6e-24 | 162 | 215 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026386135.1 162 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 215 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 38.1 | 3.7e-12 | 164 | 214 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_026386135.1 164 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 214 678***********************************************7 PP | |||||||
3 | Response_reg | 56.5 | 1.6e-19 | 11 | 95 | 26 | 109 |
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 v+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el + XP_026386135.1 11 VTTCCLARDALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKN 95 678888999*****999889**********************6644.8**********************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence |
MYTLLFSTTF VTTCCLARDA LDLLRERKDG FDIVISDVNM PDMDGFKLLE HVGLEMDLPV 60 IMMSVDGETS RVMKGVQHGA CDYLLKPVRM KELKNIWQHV LRKKIHEVRD IESYEGNEEI 120 LFRNGSERFE EGNFLSSGKK RKETENKECD DQEYSDFSSV KKARVVWSVD LHQKFVNAVN 180 QIGFDKVGPK KILDLMNVPW LTRENVASHL QKYRLYLSRL QKPNDPKSSF CGIKQPDFSQ 240 KDPPTTFAHK SSSPVLQNTA ANGSFGYTSS NLLVEGAALE THEGDLNGII SFKSVTEPIS 300 RKTLNGDVPS PRKANNSQIG FTHSLVLPEQ LDVNNISFKA NISQKHSWNR EVPIMQMKQL 360 PKQEQKLYGY THLALPSQPN KIQSESLQPS PSSINLGTSV GERDKACHLE IKPLHLEDKN 420 DDFKHGFPTA PHISNPLQAD AENTSPQEFR PILRINTDLP CMKLQGYNQH CTNTNASTWK 480 PDQRNQIQGN ESTSYCSQHE SHLGLLQDYL FIEDVELNNI VFMNYHDPDM FADVPAHLLD 540 KVRFTNDYLC ESTLEYPIMD QGLFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 4e-98 | ARR-B family protein |