PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385977.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 900aa MW: 101110 Da PI: 6.5156

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143.3	6.6e-45	15	129	3	115
CG-1 3 ke.kkrwlkneeiaaiLenfe.kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 +e + rwlk+ ei iL n++ + +t+ +++p+sgsl+L+n+ +++ frkDG++wkkk+ g+tv E he+LKvggvevl+cyYa++ enp+++ XP_026385977.1 15 QEaRVRWLKPVEIQFILLNHDgIYPFTEVVPQNPQSGSLFLINKNVTKSFRKDGHNWKKKRSGRTVAEGHERLKVGGVEVLSCYYAQGAENPNLR 109 56599***********99846889999************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyl 115 rr+yw+L+ ++++ivlvh++ XP_026385977.1 110 RRIYWMLDAAYDHIVLVHHR 129 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV 60 TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY 120 DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS 180 PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF 240 DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSETQLA 300 PVEVISRLTV AQCQKFSIQE ISPEWGYASE CSKVIITGLF HCNSSAHSWK CMFGDVEVPV 360 EIVQEGVFRR QTPPQSPGQV TFIQEGVLRC YTPPKSPGKV TLCITTGNRE ACSQIREFEY 420 CTTPTASIRN NNLPKTDGMK SAEELQLLIR FVQMLLCDSS TKKKDGITSG TNALEKLIAD 480 EYLWENLKHA VLVGSESESR IMDSLLQELL KEKLPQWLHS RFKEGESPGS TSLKKEQEII 540 HLVAGLGFEW ALNLILSSGI GINFRDTKGW TALHHAANFG REEMVVALIV AGASAGAVTD 600 PTPEDPVGKT PGSIAISRGH KGVAGYLSEL ALTSHLRSLT LEENDLTKGR SDVEAEIEVE 660 SLSIDCTDDH HSLRQSLTAV RNAALAAARI QNAFRAHSFR KRKQKEDLVS VCDEFGITAA 720 DIPALSATSK MGFPKLRDRV LQNAAVVIQK KYRGWSGQRT FLELKRKIIL IQAHVRGHQV 780 RRKLFRWAVG ILEKVLLRWR RKRVGLRGLR QETESADASD DEDILKVFRK KKVDVTVERA 840 VSWVVSMAHS RGARGQYCRL LESYRQQVKV ESCTETSSAS RDDSDSMETN NNDDFFRFPL

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV  60
TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY  120
DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS  180
PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF  240
DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSETQLA  300
PVEVISRLTV AQCQKFSIQE ISPEWGYASE CSKVIITGLF HCNSSAHSWK CMFGDVEVPV  360
EIVQEGVFRR QTPPQSPGQV TFIQEGVLRC YTPPKSPGKV TLCITTGNRE ACSQIREFEY  420
CTTPTASIRN NNLPKTDGMK SAEELQLLIR FVQMLLCDSS TKKKDGITSG TNALEKLIAD  480
EYLWENLKHA VLVGSESESR IMDSLLQELL KEKLPQWLHS RFKEGESPGS TSLKKEQEII  540
HLVAGLGFEW ALNLILSSGI GINFRDTKGW TALHHAANFG REEMVVALIV AGASAGAVTD  600
PTPEDPVGKT PGSIAISRGH KGVAGYLSEL ALTSHLRSLT LEENDLTKGR SDVEAEIEVE  660
SLSIDCTDDH HSLRQSLTAV RNAALAAARI QNAFRAHSFR KRKQKEDLVS VCDEFGITAA  720
DIPALSATSK MGFPKLRDRV LQNAAVVIQK KYRGWSGQRT FLELKRKIIL IQAHVRGHQV  780
RRKLFRWAVG ILEKVLLRWR RKRVGLRGLR QETESADASD DEDILKVFRK KKVDVTVERA  840
VSWVVSMAHS RGARGQYCRL LESYRQQVKV ESCTETSSAS RDDSDSMETN NNDDFFRFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	781	803	RRKLFRWAVGILEKVLLRWRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-154	CAMTA family protein