PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385975.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 963aa MW: 108069 Da PI: 6.3928

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143.2	7.3e-45	15	129	3	115
CG-1 3 ke.kkrwlkneeiaaiLenfe.kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 +e + rwlk+ ei iL n++ + +t+ +++p+sgsl+L+n+ +++ frkDG++wkkk+ g+tv E he+LKvggvevl+cyYa++ enp+++ XP_026385975.1 15 QEaRVRWLKPVEIQFILLNHDgIYPFTEVVPQNPQSGSLFLINKNVTKSFRKDGHNWKKKRSGRTVAEGHERLKVGGVEVLSCYYAQGAENPNLR 109 56599***********99846889999************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyl 115 rr+yw+L+ ++++ivlvh++ XP_026385975.1 110 RRIYWMLDAAYDHIVLVHHR 129 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 963 aa Download sequence
MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV 60 TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY 120 DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS 180 PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF 240 DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSGNNTQ 300 NRNIDIPIFG DTSNFHPIAS TQESSLLYAV GNSTKFSYSY GLRTHEADPN CYTTLFDAET 360 QLAPVEVISR LTVAQCQKFS IQEISPEWGY ASECSKVIIT GLFHCNSSAH SWKCMFGDVE 420 VPVEIVQEGV FRRQTPPQSP GQVTFIQEGV LRCYTPPKSP GKVTLCITTG NREACSQIRE 480 FEYCTTPTAS IRNNNLPKTD GMKSAEELQL LIRFVQMLLC DSSTKKKDGI TSGTNALEKL 540 IADEYLWENL KHAVLVGSES ESRIMDSLLQ ELLKEKLPQW LHSRFKEGES PGSTSLKKEQ 600 EIIHLVAGLG FEWALNLILS SGIGINFRDT KGWTALHHAA NFGREEMVVA LIVAGASAGA 660 VTDPTPEDPV GKTPGSIAIS RGHKGVAGYL SELALTSHLR SLTLEENDLT KGRSDVEAEI 720 EVESLSIDCT DDHHSLRQSL TAVRNAALAA ARIQNAFRAH SFRKRKQKED LVSVCDEFGI 780 TAADIPALSA TSKMGFPKLR DRVLQNAAVV IQKKYRGWSG QRTFLELKRK IILIQAHVRG 840 HQVRRKLFRW AVGILEKVLL RWRRKRVGLR GLRQETESAD ASDDEDILKV FRKKKVDVTV 900 ERAVSWVVSM AHSRGARGQY CRLLESYRQQ VKVESCTETS SASRDDSDSM ETNNNDDFFR 960 FPL

Sequence ? help Back to Top

Protein Sequence Length: 963 aa Download sequence

MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV  60
TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY  120
DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS  180
PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF  240
DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSGNNTQ  300
NRNIDIPIFG DTSNFHPIAS TQESSLLYAV GNSTKFSYSY GLRTHEADPN CYTTLFDAET  360
QLAPVEVISR LTVAQCQKFS IQEISPEWGY ASECSKVIIT GLFHCNSSAH SWKCMFGDVE  420
VPVEIVQEGV FRRQTPPQSP GQVTFIQEGV LRCYTPPKSP GKVTLCITTG NREACSQIRE  480
FEYCTTPTAS IRNNNLPKTD GMKSAEELQL LIRFVQMLLC DSSTKKKDGI TSGTNALEKL  540
IADEYLWENL KHAVLVGSES ESRIMDSLLQ ELLKEKLPQW LHSRFKEGES PGSTSLKKEQ  600
EIIHLVAGLG FEWALNLILS SGIGINFRDT KGWTALHHAA NFGREEMVVA LIVAGASAGA  660
VTDPTPEDPV GKTPGSIAIS RGHKGVAGYL SELALTSHLR SLTLEENDLT KGRSDVEAEI  720
EVESLSIDCT DDHHSLRQSL TAVRNAALAA ARIQNAFRAH SFRKRKQKED LVSVCDEFGI  780
TAADIPALSA TSKMGFPKLR DRVLQNAAVV IQKKYRGWSG QRTFLELKRK IILIQAHVRG  840
HQVRRKLFRW AVGILEKVLL RWRRKRVGLR GLRQETESAD ASDDEDILKV FRKKKVDVTV  900
ERAVSWVVSM AHSRGARGQY CRLLESYRQQ VKVESCTETS SASRDDSDSM ETNNNDDFFR  960
FPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	844	866	RRKLFRWAVGILEKVLLRWRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-153	CAMTA family protein