PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385961.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family SBP
Protein Properties Length: 376aa    MW: 41225.6 Da    PI: 8.844
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP126.79.5e-4080155277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     C v+gC+adls +++yhrrhkvCe+hsk+p vl++g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk +
  XP_026385961.1  80 CLVDGCTADLSLCRDYHRRHKVCEAHSKTPIVLINGQEQRFCQQCSRFHSLLEFDDGKRSCRKRLDGHNRRRRKCH 155
                     *************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MDWVFKPTSR NKDSSNVPIV RSSSIRGKQN STTTTTGDYS VDLNHQWQDP RVTIASSSSS  60
TLPSKKARTP PSNETQIPSC LVDGCTADLS LCRDYHRRHK VCEAHSKTPI VLINGQEQRF  120
CQQCSRFHSL LEFDDGKRSC RKRLDGHNRR RRKCHTEPLN SGSIFSDNQG NSYLQFSNPQ  180
LFQSATAGSS RHTMTAKDDT DLCGRGQYGD GQNQIARSFS CNFNGGKQYP FFHGEDSALV  240
NHVGIPTIPF SQPHNTGATY SQSSKAGKKV LFSDGFNDRV VLDSNSASSL LSSPPTQPLS  300
RQSSGFGQAD IVHTNTIPPM PHPLAGGSLQ LDGLLGFGRY QSQGLEGEPP SLNSSRGIFH  360
LGLDGSMEHG AFSWKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-43SBP family protein