PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026385946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 347aa MW: 36318.8 Da PI: 9.9262 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 125.6 | 5.2e-39 | 78 | 162 | 2 | 85 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLl+qa+p+i+++tgt++++as+ a++s+s++++s XP_026385946.1 78 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLTQAEPSIIAATGTGTIPASALaAAGASVSAQGTS 162 789******************************************************************9995444555444422 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 347 aa Download sequence |
MDPKPSSKQH HHQETPKFLG LPPSNNNMVS SGGGGGGEHN HNNTNNNNKP AEIKEFQIVV 60 AEKDDNGGST NNTKKQLAPK RSSNKDRHTK VDGRGRRIRM PALCAARIFQ LTRELGHKSD 120 GETIQWLLTQ AEPSIIAATG TGTIPASALA AAGASVSAQG TSATAGLHQK LDELSGGNAG 180 RTNWALLGGS NLGRSHGLWP SMSQFSPGGG PGGFVSPASA GGGGGPSTSN LGNESSNFLP 240 RIGFHGFELP GSNMGPMSFS SILGAGGGGG GNQQLPGLEL GLSQDGHIGV LNPQALNQFY 300 QQMAQSRTGT SSLHHQQEQH HQQQQQQQQQ QQQQQPPTKD DSQGSRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G27010.1 | 9e-54 | TCP family protein |