PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385863.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 448aa MW: 49745.2 Da PI: 4.5063

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7.2e-12	265	308	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_026385863.1 265 LMAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 308 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MLPVPGFNNG VAWIEQAEEK EEPISWMRNN KEQVVEGDEL VPMSSFKLML EDDLFMNNNP 60 LLLHQNHETK DLSFSSLLNV ICNNPLENNF DLSCYPEFLP PLQINHNGFT NLTSQEEMGS 120 SNLIPLPENV VTLTGFQEPF PLKPLEIDFC QTYRAFSQAD SSNGVEPTLF QKRIAAIKQN 180 LATPVNGGLG FLSCSDNNTG QSSVMMEDDV KGKLELLGGE QEKSVDGSCL NYDSDEGNEN 240 GNENITIVTG GDQKGKRKGA PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD 300 AIEYLKELLQ RINDLQNELE TTPPDSSTQS SVHPSTSTPA TLPSRIKEEL CPITLPSPNG 360 QPTRVEVRLS EGNGVNIHMF CARRPGLLFS TIRALDDLGL DIEQAVISCF EGFSLDVFRA 420 EQRKEASDLL PEQIKSILLD SAGFHGVM

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MLPVPGFNNG VAWIEQAEEK EEPISWMRNN KEQVVEGDEL VPMSSFKLML EDDLFMNNNP  60
LLLHQNHETK DLSFSSLLNV ICNNPLENNF DLSCYPEFLP PLQINHNGFT NLTSQEEMGS  120
SNLIPLPENV VTLTGFQEPF PLKPLEIDFC QTYRAFSQAD SSNGVEPTLF QKRIAAIKQN  180
LATPVNGGLG FLSCSDNNTG QSSVMMEDDV KGKLELLGGE QEKSVDGSCL NYDSDEGNEN  240
GNENITIVTG GDQKGKRKGA PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD  300
AIEYLKELLQ RINDLQNELE TTPPDSSTQS SVHPSTSTPA TLPSRIKEEL CPITLPSPNG  360
QPTRVEVRLS EGNGVNIHMF CARRPGLLFS TIRALDDLGL DIEQAVISCF EGFSLDVFRA  420
EQRKEASDLL PEQIKSILLD SAGFHGVM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	274	KRKGAPAKNLMAERRRRKK
2	268	275	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-95	bHLH family protein