PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385855.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 806aa    MW: 89835.9 Da    PI: 6.368
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.51.2e-23171272199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_026385855.1 171 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELIAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 262
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_026385855.1 263 GELRVGVRRA 272
                     99*****996 PP
2Auxin_resp114.78.6e-38297379183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s+ eF+v++ ++++++k++ s+GmRfkm+fe+e+++e+r++Gt++g+ d+dp rW++SkWr+Lk
  XP_026385855.1 297 AWHAVSTGTMFTVYYKPRTSPEEFIVPYGRYMESVKNSHSIGMRFKMRFEGEEAPEQRFTGTIIGTGDADPNRWSGSKWRCLK 379
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 806 aa     Download sequence    
MTSPEVSSEG NYNNIGVESF SSANCTTEPK DVVVGGGIIR NGGVSLLEPP TSVCKRKLDC  60
DEDALYSELW HACAGPLVTV PREGDLVFYF PQGHIEQVEA STNQVADQQM PVYDLPAKIL  120
CRVINVQLKA EADTDEVFAQ VTLLPEGNQD ENLMEKETVP QSSPRPLVHS FCKTLTASDT  180
STHGGFSVLR RHADECLPPL DMSRQPPTQE LIAKDLHGNE WRFRHIFRGQ PRRHLLQSGW  240
SVFVSSKRLV AGDAFIFLRG ENGELRVGVR RAMRQQSNIP SSVISSHSMH LGVLATAWHA  300
VSTGTMFTVY YKPRTSPEEF IVPYGRYMES VKNSHSIGMR FKMRFEGEEA PEQRFTGTII  360
GTGDADPNRW SGSKWRCLKV RWDETSSVPR PERVSPWKIE PALSPPALNP LPVPRSKRPR  420
TNIVPSSPDS PVLTREDDGK TIQRRIQLDI SSPQMKYESP YTDLLSGFLG TKDSHPGFHP  480
RFVDRNLGNA NSLKKHFQDK EGQFNLLPCS QPMSSSLDVM ESGRKLLTQD GNVQSQTGSA  540
RYTGLSWFPE MRSPRVEQQP GNWLMSLLPQ SGSKDPLHST EVTPNLAVHE HYESVRAKGD  600
SDYKLFGISL FSSPVGLEAP KSSSDKMDET GGHMHPLLSH LQASPPDQQS DQQEKLPRTC  660
QQPENAPSNH KGGTTRSCTK VQKQGIALGR SVDLTKFNGY DELIAELDQM FDFNGGLMAT  720
NKNWQVVYTD NEGDMMLVGD DPWQEFCSMV RKICIYTRDE VQRMNSGGTL SPRIEEESQV  780
VEEEKVAAAA NETKDVRSSA TSLRNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein