PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026385813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 614aa MW: 70204 Da PI: 6.0006 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.8 | 6.9e-07 | 106 | 128 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C f++ G+C+ Gd+C+F+Hgp XP_026385813.1 106 VPCYFYFN-GFCNKGDKCTFMHGP 128 69******.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence |
MDIKKGNTDC VYFLASPLTC KKGMECEFRH SEVARLNPRD CYYWLAGNCL NPTCSFRHPP 60 LERPETTSEP ATVPQQSSVP ATVPQQSSFP ATVPRHSSVL VNKVSVPCYF YFNGFCNKGD 120 KCTFMHGPND VSATPKVPKK APVVNIHPPE TKTYTESIKV QPAIEAPSNP VKCITSKSAV 180 KVQFRPQEVA SQPVKRKVLE RSPSLQASLP GNEEEPVKSD TPRSAEDGSE QSPSPEQKRS 240 GEQVEEEHIE REEWWESSPG LDVLVDNGLE EYEDDHEYEP VHDREGVRLH DYMLQREYKD 300 SVGYDPMEYT GAEVMYVSGI HDLYVDLDEE KMFDYACGAS NQLMDRDLDH VPYEMRKILP 360 RKVEVKGRND MDLRDELRRR KRIEGYQPYN PRRYGPTSLE IKGKEYPRLL GMSQHPRPRQ 420 LASEVSHRTI GYGSQDRDVS GVDRRSLLSL SETRRNSSRQ YENENRRRPH FLPSEVSPKV 480 PVNRKKRGRP DTSTRDLFTE EKMKPTEAGG GKRFGSKRHR VTKTRSLAGD FEGPKPLNEI 540 LKEKKMSGSV NDSSNSPRSK QENNHHVGDE RRDDESVEKN WMESVIDEDE EDGYEDYYDG 600 DDGGFEEKLA NIYS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 378 | 404 | RRRKRIEGYQPYNPRRYGPTSLEIKGK |
2 | 466 | 487 | RRRPHFLPSEVSPKVPVNRKKR |