PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385813.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 614aa    MW: 70204 Da    PI: 6.0006
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.86.9e-07106128427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     ++C f++  G+C+ Gd+C+F+Hgp
  XP_026385813.1 106 VPCYFYFN-GFCNKGDKCTFMHGP 128
                     69******.*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MDIKKGNTDC VYFLASPLTC KKGMECEFRH SEVARLNPRD CYYWLAGNCL NPTCSFRHPP  60
LERPETTSEP ATVPQQSSVP ATVPQQSSFP ATVPRHSSVL VNKVSVPCYF YFNGFCNKGD  120
KCTFMHGPND VSATPKVPKK APVVNIHPPE TKTYTESIKV QPAIEAPSNP VKCITSKSAV  180
KVQFRPQEVA SQPVKRKVLE RSPSLQASLP GNEEEPVKSD TPRSAEDGSE QSPSPEQKRS  240
GEQVEEEHIE REEWWESSPG LDVLVDNGLE EYEDDHEYEP VHDREGVRLH DYMLQREYKD  300
SVGYDPMEYT GAEVMYVSGI HDLYVDLDEE KMFDYACGAS NQLMDRDLDH VPYEMRKILP  360
RKVEVKGRND MDLRDELRRR KRIEGYQPYN PRRYGPTSLE IKGKEYPRLL GMSQHPRPRQ  420
LASEVSHRTI GYGSQDRDVS GVDRRSLLSL SETRRNSSRQ YENENRRRPH FLPSEVSPKV  480
PVNRKKRGRP DTSTRDLFTE EKMKPTEAGG GKRFGSKRHR VTKTRSLAGD FEGPKPLNEI  540
LKEKKMSGSV NDSSNSPRSK QENNHHVGDE RRDDESVEKN WMESVIDEDE EDGYEDYYDG  600
DDGGFEEKLA NIYS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1378404RRRKRIEGYQPYNPRRYGPTSLEIKGK
2466487RRRPHFLPSEVSPKVPVNRKKR