PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385613.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 564aa MW: 61607.2 Da PI: 6.0805

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	379	421	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_026385613.1 379 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 421 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MLSRLNGAAA SVWMEDEGGE GEEDSISWTR NVNNSNNLVV LGGGGNSNGI VENCNKQDEM 60 GSLSTFKSML EDDDTWYINT ANQNPNHHHH DFQTHHHQEM AGNFSTSSHH HHHSHNPIAS 120 DNLLIHSVDS SSSCSPSSVF NIDPSSFLPP QQQKSSLSSL LNVVCNNNNS FDTTTFDLSS 180 CEPSFLNHHQ TTTNITSFNN LVTQNTSSMV DTQFGVGGGG TSFGFNSMSS FNGGFDETPN 240 ALFLNSSRSK TLRPLEIFPP VGAQPTLFQK RAALRQNSDK GGGLMNLEML SSVDNNRGKM 300 SQDNWRKFSN EEEDFDEASI DGSGLNYDTD EAMEGNNNKI GESVKNGGGN NSNANSTVTG 360 GGRGDQKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIEYLKE 420 LLQRINDLHN ELESTPPGTS LPPSSSFHPL TPTPPTLPCR VKEELSPSSL PSPNSQQPAR 480 VEVRVREGRA VNIHMFCSRR PGLLLSTMRA LDGLGIDIQQ AVISCFNGFA LDVFRAEQCK 540 EGLDVPPEEI KAVLLNSAGF HGMI

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MLSRLNGAAA SVWMEDEGGE GEEDSISWTR NVNNSNNLVV LGGGGNSNGI VENCNKQDEM  60
GSLSTFKSML EDDDTWYINT ANQNPNHHHH DFQTHHHQEM AGNFSTSSHH HHHSHNPIAS  120
DNLLIHSVDS SSSCSPSSVF NIDPSSFLPP QQQKSSLSSL LNVVCNNNNS FDTTTFDLSS  180
CEPSFLNHHQ TTTNITSFNN LVTQNTSSMV DTQFGVGGGG TSFGFNSMSS FNGGFDETPN  240
ALFLNSSRSK TLRPLEIFPP VGAQPTLFQK RAALRQNSDK GGGLMNLEML SSVDNNRGKM  300
SQDNWRKFSN EEEDFDEASI DGSGLNYDTD EAMEGNNNKI GESVKNGGGN NSNANSTVTG  360
GGRGDQKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIEYLKE  420
LLQRINDLHN ELESTPPGTS LPPSSSFHPL TPTPPTLPCR VKEELSPSSL PSPNSQQPAR  480
VEVRVREGRA VNIHMFCSRR PGLLLSTMRA LDGLGIDIQQ AVISCFNGFA LDVFRAEQCK  540
EGLDVPPEEI KAVLLNSAGF HGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	387	KKKGLPAKNLMAERRRRKK
2	381	388	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	5e-91	bHLH family protein