PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385257.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 482aa MW: 52984.2 Da PI: 8.3178

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.3	1.7e-31	56	226	3	136
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................ssss 69 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + XP_026385257.1 56 GGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLqippgafdlypqpmmvspqevtdhmqtsL--- 147 78*************************************************************55555555555544433333333222220... PP TCP 70 aseceaesssssasnsssg.............................kaaksaakskksqksaasalnlak.esrakarararertrekmrikn 134 + ++ + ++ ++++s+++ +nl+ ++k+++ +e t++++r+++ XP_026385257.1 148 ------------------AslvdsyvkdgdatnllrshkagfnmndnsEKHDGSRQTTDATTSESKYWNLNSpMRSSKSKEVVHETTTSDQRNNW 224 ..................12333333344444445554445555444333333334444555555556666633445566666677777777766 PP TCP 135 kl 136 XP_026385257.1 225 MM 226 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MQYKMITNSR GKDLTTKQEG NDNNDKITKG PAASTSRSSW SGLKDPRVVR VSRTFGGKDR 60 HSKVCTVRGL RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKD EIDELPPLQI 120 PPGAFDLYPQ PMMVSPQEVT DHMQTSLASL VDSYVKDGDA TNLLRSHKAG FNMNDNSEKH 180 DGSRQTTDAT TSESKYWNLN SPMRSSKSKE VVHETTTSDQ RNNWMMNSKR SIHDQQGHGQ 240 ENGEAAHNAQ VGSSHHHSLH NPARANLSSL SGFQSNNNVM IPQSSFYHWD PSNLSLSQLG 300 NQGSGFSTSS QTSEDPHNFN ILSMGSSSQL SALPPGSHHQ LLVCPPGATP PFFQPYATSI 360 AQMENGAQSR QIHNHFQMLS SSSSAGNLHQ NLQLNSLTPS LYSISPARNP SSMMMMRPLQ 420 LGVNITHPSS SKQLHHSQNN NGGGSDNDNN DHQTNKQGNN IITTNGLSSS FTSGYSFQND 480 QN

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MQYKMITNSR GKDLTTKQEG NDNNDKITKG PAASTSRSSW SGLKDPRVVR VSRTFGGKDR  60
HSKVCTVRGL RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKD EIDELPPLQI  120
PPGAFDLYPQ PMMVSPQEVT DHMQTSLASL VDSYVKDGDA TNLLRSHKAG FNMNDNSEKH  180
DGSRQTTDAT TSESKYWNLN SPMRSSKSKE VVHETTTSDQ RNNWMMNSKR SIHDQQGHGQ  240
ENGEAAHNAQ VGSSHHHSLH NPARANLSSL SGFQSNNNVM IPQSSFYHWD PSNLSLSQLG  300
NQGSGFSTSS QTSEDPHNFN ILSMGSSSQL SALPPGSHHQ LLVCPPGATP PFFQPYATSI  360
AQMENGAQSR QIHNHFQMLS SSSSAGNLHQ NLQLNSLTPS LYSISPARNP SSMMMMRPLQ  420
LGVNITHPSS SKQLHHSQNN NGGGSDNDNN DHQTNKQGNN IITTNGLSSS FTSGYSFQND  480
QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-47	TCP family protein