PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384938.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 504aa MW: 56673.4 Da PI: 6.8404

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66	6.8e-21	180	233	1	55
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026384938.1 180 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILAEMNVQGLTREKVASHLQKYRK 233 6899758*********4..89**************************5 PP
2	Myb_DNA-binding	29.9	1.3e-09	188	232	6	48
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I ++m+ +g+t++ + s++qky+ XP_026384938.1 188 PELHAKFVEAFYKLGDKaVPSKILAEMNvQGLTREKVASHLQKYR 232 8************99*************************7 PP
3	Response_reg	77.8	3.8e-26	14	122	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ l ++ll+ +l+k +y ev+++ ++ +al ll++++ +D++++D++m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ G XP_026384938.1 14 VLAVDDSSLCLKLLEALLKKCRY-EVTATLSANAALGLLRKNKknFDIVITDVQMDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHG 106 799******************.***********777778******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp + +e+ + XP_026384938.1 107 ACDYLVKPPSLKEIQN 122 ******98888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEFMNDKFPE GLRVLAVDDS SLCLKLLEAL LKKCRYEVTA TLSANAALGL LRKNKKNFDI 60 VITDVQMDEM NGFELLKTIG LEMDIPVIMM STSGDYETVM KGIEHGACDY LVKPPSLKEI 120 QNIWQHVVRL KKNKSTLSDP DTEKKGTERN LKRRNNNQTK SNEDEDSSHS SDELLPNQKK 180 TRISWADPEL HAKFVEAFYK LGDKAVPSKI LAEMNVQGLT REKVASHLQK YRKIMEKQSK 240 KPNSITTFNG MSGRLRNSTF PSLLNLQFQN GRNYLSSSQS YHRGTNQLSH YGVTPNPSNR 300 SFVNPHPHFL PSTQPYTSQY SSTLGTINQN PQKIQVSDST MHNLHNQTYA SGLNAQTFSS 360 SSKLFDPHMV SSSKFPDYNA NIHSGTSNFQ FGEASNVLAN NNLFDDLTYY SMLDHASSSN 420 LNTVFQSDYT FNMTHSTLSG YDDGMRNMVA PTIPSTNVME SQSVDQIPSL ENPLAFLETD 480 SDHLGSYSFA DDDLSAAIRP YQQQ

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEFMNDKFPE GLRVLAVDDS SLCLKLLEAL LKKCRYEVTA TLSANAALGL LRKNKKNFDI  60
VITDVQMDEM NGFELLKTIG LEMDIPVIMM STSGDYETVM KGIEHGACDY LVKPPSLKEI  120
QNIWQHVVRL KKNKSTLSDP DTEKKGTERN LKRRNNNQTK SNEDEDSSHS SDELLPNQKK  180
TRISWADPEL HAKFVEAFYK LGDKAVPSKI LAEMNVQGLT REKVASHLQK YRKIMEKQSK  240
KPNSITTFNG MSGRLRNSTF PSLLNLQFQN GRNYLSSSQS YHRGTNQLSH YGVTPNPSNR  300
SFVNPHPHFL PSTQPYTSQY SSTLGTINQN PQKIQVSDST MHNLHNQTYA SGLNAQTFSS  360
SSKLFDPHMV SSSKFPDYNA NIHSGTSNFQ FGEASNVLAN NNLFDDLTYY SMLDHASSSN  420
LNTVFQSDYT FNMTHSTLSG YDDGMRNMVA PTIPSTNVME SQSVDQIPSL ENPLAFLETD  480
SDHLGSYSFA DDDLSAAIRP YQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	3e-58	ARR-B family protein