PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026384644.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 416aa    MW: 48472.2 Da    PI: 8.2559
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026384644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.25.4e-13301021488
            FAR1  14 vrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     vr+s+s++  ++++ +++ +vCs +g+r ++k++ ++ +++raetr +C a++k+++++++k+ + ++ + H+H 
  XP_026384644.1  30 VRRSTSHSF-KDDKLKDKLYVCSAQGTRVKDKRD-VNVKKHRAETRFECLARMKISLTQTSKYAIVDFYSYHTHI 102
                     666666666.6666*****************999.99*************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MEPPPPLQNS LSECHRADVG SECHRADVGV RRSTSHSFKD DKLKDKLYVC SAQGTRVKDK  60
RDVNVKKHRA ETRFECLARM KISLTQTSKY AIVDFYSYHT HITTTPRKSH LFRSQRRLST  120
AIITQVDMAD ASGIAPRESM EFLSRQSGGR QNVGIIPLDY KNYLRYKRTR RMETGNTGCV  180
LEYLQKMKLN DPIFFPAIQV DKDDLITNIF WNDVRMVVDY DYFGDVVSFD TTHMKNKDER  240
PFSMFVGVNN HRQTIIFGDA LLYDETAETF MWCFDTFAET MSGKKPKSIF TDQDAAMAKA  300
LASQWAESCH RLCIWHLFQN AAKHLFHEFH KFNDFTKDFT NCVYDYEDEI EFTDAWKKML  360
AKYNLQNNDW LKGLFSLREK WALIYARDTF CAEMTTTQRG ESLNSVLKNI LVTSMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-79FAR1 family protein