PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384014.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 723aa MW: 83454.1 Da PI: 7.2618

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43	1.5e-13	129	213	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y +Y+ + GF+v +++++ + g t Cs+e kr +++k+ r ++ ++ t+C+ak++ ++ dg +++++++leHnH+l+p XP_026384014.1 129 YYTNYGIQQGFRVNRRSTRCD-DYGILRYFTHACSREKKRMSTSKN----RYSNLSSGTNCQAKIRTIMQCDGSFKLSSVVLEHNHPLTP 213 9**********99987776.88889999******999888....99***********9999**************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MELTGDDPFS GRLWGSNIFH FLVLNIVTTA TVSLGFLPVT PLLDAINDFF TPIQCYNEGD 60 VLLLNNQIFT EMESTRIDML AVEEVGDCDV NVGNGECQQG TGQNLEGNEK LEEPKVGMVF 120 SSQDDVYRYY TNYGIQQGFR VNRRSTRCDD YGILRYFTHA CSREKKRMST SKNRYSNLSS 180 GTNCQAKIRT IMQCDGSFKL SSVVLEHNHP LTPGETRCFK YKKLDQDAKT RVRQQSRTSE 240 IVQTGVCEKL MVGDKRSRDN NGQVKTLMLE EGDAAVLQIF FVKMQTRNSN FFYVMDMDED 300 CTVRNIFWAD ARSRAAYEDF GDVVTLDTSY LRNKFALPLV PFVGVNHHGQ PVLLGYALLS 360 NEDVGTFLWL FKSWLACMMG IPPKAIITDQ SQAIQKAVQT VFPNVQYRLC LWQVMKKTRE 420 KLKGCSQYKA IKISLQNSVC KSTSKDEFQD EWRKVIEKYG LHDNEWLKEL YVERHRWVPI 480 YTKETFWAGM STARRSESSC ALFNGHVNSK TTLKQFLEQY DNIIRSKVEK ENRADYESLF 540 SRYDCITHYE IEKQFQEVYT NTKFKEFQEE IMGKLYCYTS LVKEEDSIFI IQVTEHVKVG 600 DSEKDAKFIV NFSAVDCELN CTCHLFEFSG IICRHTLSVL TQSKVQQVPS KYILSRWRKD 660 IKRKCSFVKA SYQDLDVNPS VQQYHEMCRY FHEVATMSAD CKDQSITVMN ALHDLKAKIG 720 MPV

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MELTGDDPFS GRLWGSNIFH FLVLNIVTTA TVSLGFLPVT PLLDAINDFF TPIQCYNEGD  60
VLLLNNQIFT EMESTRIDML AVEEVGDCDV NVGNGECQQG TGQNLEGNEK LEEPKVGMVF  120
SSQDDVYRYY TNYGIQQGFR VNRRSTRCDD YGILRYFTHA CSREKKRMST SKNRYSNLSS  180
GTNCQAKIRT IMQCDGSFKL SSVVLEHNHP LTPGETRCFK YKKLDQDAKT RVRQQSRTSE  240
IVQTGVCEKL MVGDKRSRDN NGQVKTLMLE EGDAAVLQIF FVKMQTRNSN FFYVMDMDED  300
CTVRNIFWAD ARSRAAYEDF GDVVTLDTSY LRNKFALPLV PFVGVNHHGQ PVLLGYALLS  360
NEDVGTFLWL FKSWLACMMG IPPKAIITDQ SQAIQKAVQT VFPNVQYRLC LWQVMKKTRE  420
KLKGCSQYKA IKISLQNSVC KSTSKDEFQD EWRKVIEKYG LHDNEWLKEL YVERHRWVPI  480
YTKETFWAGM STARRSESSC ALFNGHVNSK TTLKQFLEQY DNIIRSKVEK ENRADYESLF  540
SRYDCITHYE IEKQFQEVYT NTKFKEFQEE IMGKLYCYTS LVKEEDSIFI IQVTEHVKVG  600
DSEKDAKFIV NFSAVDCELN CTCHLFEFSG IICRHTLSVL TQSKVQQVPS KYILSRWRKD  660
IKRKCSFVKA SYQDLDVNPS VQQYHEMCRY FHEVATMSAD CKDQSITVMN ALHDLKAKIG  720
MPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-113	FAR1 family protein