PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383988.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 878aa    MW: 97877.8 Da    PI: 6.2087
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.62.8e-24129230199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g+ W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_026383988.1 129 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNDWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 219
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_026383988.1 220 KNQLLLGIRRA 230
                     9999****997 PP
2Auxin_resp118.17.2e-39255338183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras++eFv+++ k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldp+rWpnS+Wrs+k
  XP_026383988.1 255 AAHAAATNSRFTIFYNPRASPTEFVIPLTKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPTRWPNSHWRSVK 338
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 878 aa     Download sequence    
MRMSSSGFGQ QQTQEGGEKR CLNSELWHAC AGPLVSLPAL GSRVVYFPQG HSEQVAASTN  60
KEIESHIPNY PSLPPQLICQ LHNVTMHADV ETDEVYAQMT LQPLSTQEQN DSFLPVELGC  120
PSKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF SQQPPAQELI ARDLHGNDWK  180
FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA SRPQTVMPSS  240
VLSSDSMHIG LLAAAAHAAA TNSRFTIFYN PRASPTEFVI PLTKYAKAVY HTRVSVGMRF  300
RMLFETEESS VRRYMGTITG ISDLDPTRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP  360
LTTFPMYPSS FPLRLKRPWP AGLPNPLGGR DDNVGLNSPL MWYRGDTGDK GMESLNFQGI  420
GVTPWIQPRL DASLLGLQPD VYQAMAAAAL QEMRTMDPSK QVDESLMQFS QSQNVPGSAL  480
MQRQMLQPSQ AFVQGIQENQ FHTQAQMQAL LQQQLLQSRS FNDQQQQQQQ QQQQQQQQQQ  540
QQQQQQQQLQ QPHQQQQQQY PSPQQQIPNV VSSLSHLVSS PQSQASMQTI RSVSQQPNYS  600
GFAGNLIATS SLSPLHSLLG SFSQTEASQL LNMPISNPLP PSAATWLLRQ ASADSLVRSG  660
AATQCDLPQV DQLGTQQGNA LHHTLSLPPF SDRDSSVDQE GSTDPQNNLL FGVNIDSSSL  720
LAHNGMSSLR GVGSECESTN VPFASANFLN TTNTDYPLNP DMTPSSCIDE SDFLPSPENG  780
DQGNPPRTFV KVHKSGSFGR SLDITRFSSY YELRSELASM FGLEGQLEDP LRSGWQLVFV  840
DRENDVLLLG DDPWQELRIL QLLILSLMVL EHFWGIRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein