PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383970.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 534aa MW: 61314.1 Da PI: 9.8542

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.3	4.2e-55	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv ++++++ ++i+evd +k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgk++e++s+ XP_026383970.1 15 LPPGFRFHPTDEELITYYLLKKVLDSNFTC-RAITEVDFNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKNREIYSS 108 79************************99.89***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++l g+kktLvfykgrapkgek++Wvmheyrle XP_026383970.1 109 kTSSLLGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 143 56778**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MDNFLKIDSN NESYLPPGFR FHPTDEELIT YYLLKKVLDS NFTCRAITEV DFNKCEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KNREIYSSKT SSLLGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLEGKLSYRY LSKTSRDERV ISRVFKKSSG TGGWGGGKRL 180 GVVSYGGGVG CYSSDVGSPS SNSLPPLLDS SAGFAATDHE ISCSNYESDN NTRKHVPCFS 240 TNNIVVPNAV VVDNLNPLYG TGTSRFGSSS STSSMISNAG LFPSLRSLQD NLYFPNFFSP 300 SPMSTVATTA APLSEHRYHP EYQNNINNSW VHETMQPKVE RVQMPLGLSF KSQLVFIDPK 360 CLRHHLLAGN DKMYFRSFHV LSYFSFSFQV KNYLREEKLP LFGGLGIKNL KKMNQALLTK 420 WLWRFANEED ALWRKIVAEK YGTDGVGWLS KCPKIYFGRS VWKGIMKCSS IFRSNIKFKK 480 KEKFCVQVFY WKWIVNWDVG VPRILNSNMR AEMIWLQRDM NNVKIKLEEE DVLE

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MDNFLKIDSN NESYLPPGFR FHPTDEELIT YYLLKKVLDS NFTCRAITEV DFNKCEPWEL  60
PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KNREIYSSKT SSLLGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLEGKLSYRY LSKTSRDERV ISRVFKKSSG TGGWGGGKRL  180
GVVSYGGGVG CYSSDVGSPS SNSLPPLLDS SAGFAATDHE ISCSNYESDN NTRKHVPCFS  240
TNNIVVPNAV VVDNLNPLYG TGTSRFGSSS STSSMISNAG LFPSLRSLQD NLYFPNFFSP  300
SPMSTVATTA APLSEHRYHP EYQNNINNSW VHETMQPKVE RVQMPLGLSF KSQLVFIDPK  360
CLRHHLLAGN DKMYFRSFHV LSYFSFSFQV KNYLREEKLP LFGGLGIKNL KKMNQALLTK  420
WLWRFANEED ALWRKIVAEK YGTDGVGWLS KCPKIYFGRS VWKGIMKCSS IFRSNIKFKK  480
KEKFCVQVFY WKWIVNWDVG VPRILNSNMR AEMIWLQRDM NNVKIKLEEE DVLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	6e-92	NAC family protein