PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383807.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 315aa    MW: 35691.7 Da    PI: 4.9489
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.92.6e-26116203190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYn+YA++vGFs+rk++ +k+k ++e++ r f+C  eg+re++ +   +  ++ra trtgC a+++++ ++d+++ + ++++eHnHel+
  XP_026383807.1 116 EFYNAYARTVGFSMRKQSASKTKADKEVMGRIFCCLGEGEREKHPRG--TPTKPRALTRTGCMARMQIRINDDETYSIVSFVTEHNHELS 203
                     6******************************************9998..9999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDDESNTDDN GKTPTAKIPQ YQQSLIVYEK QYPKANDEPK PYNDDSQSGG GAPKTMEEQE  60
KSYSIDLNET ADPGESISEE NYVQTITEVS VVTGKPMEND VNIIGRTFKS DDDAYEFYNA  120
YARTVGFSMR KQSASKTKAD KEVMGRIFCC LGEGEREKHP RGTPTKPRAL TRTGCMARMQ  180
IRINDDETYS IVSFVTEHNH ELSSQDKVHL LRSQRKIQPA QATLINNMVS AGFGATRIFS  240
YMSEEAGGPQ NLNFTQEDCN NLVQEKRIDY LKVGDAKVLL AYFKRNQKEN KSFFYTIQVG  300
DDDRIMNCFW CDAKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-42FAR1 family protein