PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383673.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 864aa    MW: 94908.9 Da    PI: 6.7405
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.7e-183693457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_026383673.1 36 YVRYTPEQVEALERVYIECPKPSSLRRQQLVRECpilsNIEPKQIKVWFQNRRCREKQ 93
                    5789****************************************************97 PP
2START159.52.5e-501833902204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++++++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ e+l v  +g  g+++l+
  XP_026383673.1 183 IAEETLTQFLAKATGTAVDWVQMLGMKPGPDSIGIVAVSHNCSGVAARACGLVSLEPM-KVAEILKDRPSWFRDCRSLEILSVQPTGngGTIELI 276
                     68999*****************************************************.8888888888***************99999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++lv+ Rd++++Ry+  l++g++vi+++S+++ +  +     +++vRae+l Sg+li+p+++g+s +++v+hv+l++++++++lr+l+
  XP_026383673.1 277 YMQTYAPTTLVSaRDYWTLRYTTGLEDGSLVICERSLTPSNGGSGgppAPNFVRAEMLSSGYLIRPCDGGGSMIHIVDHVNLDAWSVPEVLRPLY 371
                     ****************************************99887788*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s  + ++k++ a+l++ +
  XP_026383673.1 372 ESPKILAQKMTIAALRYIR 390
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 864 aa     Download sequence    
MALSMYNHHH NNQRELSSTS LKQQQQQQQQ MDTIKYVRYT PEQVEALERV YIECPKPSSL  60
RRQQLVRECP ILSNIEPKQI KVWFQNRRCR EKQRTEASRL QTVNRKLTAM NKLLMEENDR  120
LQKQVSQFVY ENGYMKTQLT NASAVTTDTS CESVVTSGQR QQQQNPTLHP PRDANNPAGL  180
LAIAEETLTQ FLAKATGTAV DWVQMLGMKP GPDSIGIVAV SHNCSGVAAR ACGLVSLEPM  240
KVAEILKDRP SWFRDCRSLE ILSVQPTGNG GTIELIYMQT YAPTTLVSAR DYWTLRYTTG  300
LEDGSLVICE RSLTPSNGGS GGPPAPNFVR AEMLSSGYLI RPCDGGGSMI HIVDHVNLDA  360
WSVPEVLRPL YESPKILAQK MTIAALRYIR QISQEMSGEI RHSGGRQPAV LRTFSQRLCR  420
GFNDAVNGFA DDGWSVLGSD GVEDVTIAIN SSSSKLPCSQ GNSSTMLSIL GGGVVCAKAS  480
MLLKNVPPAL LVRFLREHRS EWADYGVDAY AAASMKSCPY SIPGARPSNF SSNFPSSHVV  540
IPLAHTLENE EALEVVRLES RGFSQDGVLS QDMYLLQLCS GVDENAAGSC AQLVFAPIDE  600
SFPDDAPLLP SGFRVIPLEP KTDSRTASRT LDLASTLEAG AGGSRPSSDD NNELKSVLTI  660
AFQFTYGNHS RDDVIAMARQ YVRSIVGSVQ RVAMAISPSR LNSTLGPKTL AGSPEAVTLA  720
RWISRSYRFH TGMELLLSDP QASGDSLLKS LWHHSDAIMC CSMKSNASPV FTFANQAGLD  780
LLETTLVALQ DIMLDKVLDE TGRKTLCSEF SKIMHQGYSQ LPAGICVSSM GRPVSYDQAI  840
AWKVLDDDGT NHCLAFMFMN WSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein